Transcript Information: S_Transcript_2757.p1


Annotated TAIR IDAT3G11960.1
Annotated Gene NameCleavage and polyadenylation specificity factor (CPSF) A subunit protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3786431-3793160 | Forward length=1379
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9184737996544
Replicate 27.0928029969318
Replicate 36.8218592623908
Condition 2: 8 Hour
Replicate 18.2752838371325
Replicate 27.9198374912194
Replicate 38.1909611069066
Condition 3: 24 Hour
Replicate 18.6916858669081
Replicate 27.1488724866391
Replicate 37.688717016083


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2757.p1 GENE.S_Transcript_2757~~S_Transcript_2757.p1 ORF type:complete len:1322 (+),score=267.84,MMS1_N|PF10433.5|1.1e-104,CPSF_A|PF03178.11|0.26,CPSF_A|PF03178.11|4.2e-31 S_Transcript_2757:100-4065(+)
ATGATCAAAGACCTGGCTGTTTTGCCCTGGAATGAGAAGTTCCAGACACGAAATATACAGATGCGGGGGAAAGACCTGTTGCTCGTTACTTCTGATTCTGGAAAGCTTTCATTCCTCACATTTTGCAATGAAATGCACAGGTTCTTTCCAGTGACTCATGTGCAACTCTCTGATCCTGGAAATTCAAGGCTTCAGATTGGCAGACAGCTTGCTGTTGATCGCAGTGGCTGTTATATTGCTGTTAGTGCGTACGAAGAGCGTCTGGCTCTGTTCTCTGTTTCAGCATCTAGCGACATTGATATGATTGATAAGCGAATAACATATCCTCCTGAACCTGAAGATGACTTGATTAGCAGAGAAATCCAGAAGACAAGAAAATCTATTTTACTTAGCTCCCACCCAACAGAGTCAGTTGCTGCAGACTCTGGTTCCATTCCGCCAATCCCGCCTTATATAAATGGTACTATATGGAGTATGTGTTTTATTTCGAAGGATCCATTGCAATCAATTAAGGAGTACAATCCTGTACTAGCTGTTGTTGTAAATAGGAGACGGTCATCCCTGAATGAGCTGTTGCTGTTGGGATGGGATGTAAGAGAGAATACTGTTCATGTTCTTTCTCAGTTTGTTGAGGGAGGGTCTTTGGCACATACAGTTACTGAAGTTCCTGGATCTGGGGGACTTGCATTGTTATTTAGGATGGGGGATATTTTGCTTATGGATCTTAGGGATGCTTGTAATCCTGTTTGTGTGCAAAAAACAGTTCTCACTTCCGCAGTTTCTATGATCGAGGAGCAGAATTGTATGGAAGAACCTTACAGAATACATGATGGTGATGATGAGGGTTTCATTGCTGCCCGTGCTCTTCTAGAGCTGCAAGACTATGGTATGGATATTAGTAAAGGTGATGATCCAATGAGCATTGACAATGATACAGGGAACGGGAAATCTGTACCCAAATATGTCTGCTCATGGAGTTGGGAACCAGATGGTCCTGGGATCAAAGCAAATCCAAGGATGATGTTTTCTGTGGATACAGGGGAAGTTTTCTTGATTGAAATTACTGTTGAGCCTGATGGCCATAGTATCAGTTTGTCTGATTTTCTTTATCACGGTCTACCCTGCAAAGCGCTATTATGGACTGAAGGTGGGTTCTTGGCAGCAATTGTGGAGATGGGTGATGGAATTGTCCTAAAACTACAAGATGGGAGGCTAGAGTATTCAAGTCCAATTCAAAATATTGCTCCAATCTTGGACATGTCAGTTATGGACTACCACAATGAAAAGCATGATCAGATGTTTGCTTGCTGTGGAACAGCTCCTGAAGGGTCAATGAGGATTATTAGAAGTGGCATCAGTGTGGAAAGATTATTGAGAACAGCTCCCATATATCAAGGCATAACTGCAACGTGGACTGTTAAGATGAGGTTAAATGATATGTACCATTCTTTTCTTGTGCTTTCTTTTGTTGAAGAAACTAGAGTGTTGTCTGTTGGTGTAAGCTTTACAGATGTGACCGATTCAGTTGGTTTTCAGCCTGATGTTTGTACTTTGGCCTGTGGTCTTGTTGATGATGGTTTGTTGGTTCAAATCCATCAAAATTCAGTTAGACTTTGCTTACCTACTGCAGTTGCTCATCCTGAGGGTATTCCAATGTCTTTTCCAGCATGCACTTCCTGGTCTCCTGATAATATTGGCATCAACCTGGGCGCAGTTGGACATAATTTTATTGTTGTGGCTACCTCAAATCCTTGCTTCCTTATAATTCTTGGTGTGAAATATGTGTCTTTACATCACTATGAAGTATATGAGATGCAACATATTAAACTTCAGAGTGAGTTGTCATGCATATCTATACCTCAAAAACACATTACAAGGAAAGAATCTGTTAATTTACCAGCTGGAGTTGATCTTGGTCGTACATTTGTAATTGGGACACATAAGCCATCTGTAGAAATTCTATCTTATACACATGGTCAAGGCATACGAGTTCTTGCTACTGGGATCATCTCACTAACAAGTACAACAGGAACTGCTATAAGTGGTTGTGTCCCTCAGGATGTAAGGCTTGTACTTGTTGATAGGTTATATGTTCTCTCTGGGTTGAGAAATGGAATGCTACTACGCTTTGAGTGGCCTACTATATCCTGGGGATCTGAATTACCTAGTCATAGGACCTCCATATTTGCAAAATCTGGTTTGTTAAGGACATCGGCTGCAGCTGGTATTGATCCTCTAAGTGGAGTCGATGTTTATGAGAAGCCAAAGGACAATGATCCTGTTCACCTCCAGTTAATTGCTGTTCGTCGGATTGGTATAACTCCTGTATTCCTAGTTCCACTGAATGATTCATTGGATGCAGATATTATTGCTCTTAGTGACAGACCTTGGTTGGTCCAAGCTGCAAGGCACAGTCTCTCATACATCTCGATATCATTTCAAACTTCAATATGTGTGACACCTGTTTCTTCAGCTGAATGCCCAAGGGGACTTTTATTTGTTGCAGAGAACAGTCTGCATCTGGTAGAGATGGTGTATAGCAAGAGGCTTAATGTGCAGAAGTTTCATCTAGGTGGAACTCCACGGAAGGTTCTGTATCACAGTGAGAGTCGCTTGTTGCTGGTTTTGAGGACTGATTTGGGTAACGAGTCAAATTTATCTGATATTTGTTGTGTGGATCCCCTCACCGGTTCAGTGATATCATCATTTAAATTTGACCCGGGTGAAACTGGAAAAAGCATGGAATTAGTGAGGGCTGGCAATGATCAGGTACTGGCAGTTGGAACAAGTTTATCTGCTGGGCCTGTCATAATGCCTAGTGGAGAAGCTGAAAGTACAAAGGGCCGTTTTATCGTGCTATGCCTTGAGCACTCACCAAGTTCAGATAGTGGGTCGATGACAATATGCTCAAAGGCTGGTTCCTCATCGCAACGAGCTTCACAATTTGGTGAAGCTCCTGGATATTCTGCTGAACAGATGTCCAATAGTAGTCTCTGCAGCAGCCCAGATGATAGCTGTGATGGATTAAAACTTGACGATACTGAAGCTTGGCAGCTGCGATTGGCTTTCTCAGCTACTTGGCCTGGAGTAGTGCTTGCAATCTGTCCCTACCTTGATCAGTACTTCCTAGTTTCTTCTGGCAATGCCTTCTATTTATGTGGCTTTACAAAGGGTAATCCTCAAAGTGTAAGAAGGTTTGCTGTTGAAAGAACGCGATTTATGATAGTTTCGTTGACAGCATACTTTACAAGAATTGCTGTTGGTGATTGCCGCGATGGTGTACTTTTCTATTCTTATCATGAGGATGTCAGAAAATTGGAGCAGATGTATAGCGATCCTGGTCAGAGGTTAGTTGCTGATTGCTTACTCACTGATACAGAGACTGCCATTGTCTCAGATCGTAAGGGAAGCATCGCTGTTCTGACTTGTTCAACTGATTGGGAAGATAATGTGAATCCTGAATGCAACTTGTCACTTTGCTGTACGTATTACATGGGCGAGATTGCTATGAGCATCAGAAAGGGGTCATTCTCATACAAACTTCCTGTAGAGGACGCGTTTAAAGTGTGTGATGGTGGTAGTAATGTGATTAATATGTCGCACAGCGCCATCATGGCTGGGACACTACTTGGAAGCATAGTGATTTTCATCCCTATATCAAGAGAGGAGTATGAGCTCTTGAAAACTGTACAAGCCAGATTAGCAGTTCATCCTCTAACTGCTCCTATACTTGGAAATAATCATAGTGAATTTCGTAGTCGTGAAAATCAGGTGGCAGTCCCCACCATACTCGATGGAGATATGTTAGCTCAGTTTCTGGATCTTACAAGCATCCAACAAGAAGCCGTATTGGCACTGCCTTGTGCTACTGCTGAAGTGTCATCAAGTTTCCGATCACCTCATTCACATATATCTGTCAACCAGGTGGTGCAACTCCTCGAAAGAATTCACTATGCACTTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2757.p1 GENE.S_Transcript_2757~~S_Transcript_2757.p1 ORF type:complete len:1322 (+),score=267.84,MMS1_N|PF10433.5|1.1e-104,CPSF_A|PF03178.11|0.26,CPSF_A|PF03178.11|4.2e-31 S_Transcript_2757:100-4065(+)
MIKDLAVLPWNEKFQTRNIQMRGKDLLLVTSDSGKLSFLTFCNEMHRFFPVTHVQLSDPGNSRLQIGRQLAVDRSGCYIAVSAYEERLALFSVSASSDIDMIDKRITYPPEPEDDLISREIQKTRKSILLSSHPTESVAADSGSIPPIPPYINGTIWSMCFISKDPLQSIKEYNPVLAVVVNRRRSSLNELLLLGWDVRENTVHVLSQFVEGGSLAHTVTEVPGSGGLALLFRMGDILLMDLRDACNPVCVQKTVLTSAVSMIEEQNCMEEPYRIHDGDDEGFIAARALLELQDYGMDISKGDDPMSIDNDTGNGKSVPKYVCSWSWEPDGPGIKANPRMMFSVDTGEVFLIEITVEPDGHSISLSDFLYHGLPCKALLWTEGGFLAAIVEMGDGIVLKLQDGRLEYSSPIQNIAPILDMSVMDYHNEKHDQMFACCGTAPEGSMRIIRSGISVERLLRTAPIYQGITATWTVKMRLNDMYHSFLVLSFVEETRVLSVGVSFTDVTDSVGFQPDVCTLACGLVDDGLLVQIHQNSVRLCLPTAVAHPEGIPMSFPACTSWSPDNIGINLGAVGHNFIVVATSNPCFLIILGVKYVSLHHYEVYEMQHIKLQSELSCISIPQKHITRKESVNLPAGVDLGRTFVIGTHKPSVEILSYTHGQGIRVLATGIISLTSTTGTAISGCVPQDVRLVLVDRLYVLSGLRNGMLLRFEWPTISWGSELPSHRTSIFAKSGLLRTSAAAGIDPLSGVDVYEKPKDNDPVHLQLIAVRRIGITPVFLVPLNDSLDADIIALSDRPWLVQAARHSLSYISISFQTSICVTPVSSAECPRGLLFVAENSLHLVEMVYSKRLNVQKFHLGGTPRKVLYHSESRLLLVLRTDLGNESNLSDICCVDPLTGSVISSFKFDPGETGKSMELVRAGNDQVLAVGTSLSAGPVIMPSGEAESTKGRFIVLCLEHSPSSDSGSMTICSKAGSSSQRASQFGEAPGYSAEQMSNSSLCSSPDDSCDGLKLDDTEAWQLRLAFSATWPGVVLAICPYLDQYFLVSSGNAFYLCGFTKGNPQSVRRFAVERTRFMIVSLTAYFTRIAVGDCRDGVLFYSYHEDVRKLEQMYSDPGQRLVADCLLTDTETAIVSDRKGSIAVLTCSTDWEDNVNPECNLSLCCTYYMGEIAMSIRKGSFSYKLPVEDAFKVCDGGSNVINMSHSAIMAGTLLGSIVIFIPISREEYELLKTVQARLAVHPLTAPILGNNHSEFRSRENQVAVPTILDGDMLAQFLDLTSIQQEAVLALPCATAEVSSSFRSPHSHISVNQVVQLLERIHYALN*

Click here to download the sequence:
Link to NCBI Protein BLAST