Transcript Information: S_Transcript_275710.p1


Annotated TAIR IDAT5G65570.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26203968-26206184 | Forward length=738
E-Value3E-271
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62145744642592
Replicate 20.87887485874716
Replicate 31.0386705761368
Condition 2: 8 Hour
Replicate 11.8454664697519
Replicate 21.8745642404167
Replicate 31.9324806894626
Condition 3: 24 Hour
Replicate 10.96021465892722
Replicate 20.84055345132058
Replicate 31.1086612925326


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_275710.p1 GENE.S_Transcript_275710~~S_Transcript_275710.p1 ORF type:complete len:728 (+),score=104.94,PPR_2|PF13041.2|0.00041,PPR_2|PF13041.2|2e-12,PPR_2|PF13041.2|4.1e+03,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|54,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|2.8e-05,PPR_2|PF13041.2|6.7,PPR_2|PF13041.2|12,PPR|PF01535.16|0.00025,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|62,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|4.5e+03,PPR|PF01535.16|0.26,PPR|PF01535.16|9.7e-05,PPR|PF01535.16|3.3,PPR|PF01535.16|0.013,PPR|PF01535.16|29,PPR|PF01535.16|0.045,PPR|PF01535.16|3.3,PPR|PF01535.16|1.3e+03,DYW_deaminase|PF14432.2|4.2e-32,PPR_3|PF13812.2|4e+03,PPR_3|PF13812.2|0.00047,PPR_3|PF13812.2|0.89,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|0.00026,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|5.2e+02,PPR_3|PF13812.2|93,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|38,PPR_1|PF12854.3|0.094,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|5.2e+03,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|48,PPR_1|PF12854.3|0.052,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|8.3,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|9.7e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.5e+02,TPR_14|PF13428.2|20,TPR_14|PF13428.2|3.5,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|3.5e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|13,TPR_14|PF13428.2|1.6 S_Transcript_275710:276-2459(+)
ATGGCAGGTTTCAGTTGGCTGGTAAAAGGATCACGCAACCCATTCAGTGTTGTTAGAATCCTACAAAAGGGCACTCACAATCAGACTTATTACATCATCAGAAACATTGCCATCTCCGCACTCCAAATACAACGATATTCAAACCACAAGGAGTCCTCAGATCTGTACCTCTCTTTAATCCAACAATGCAAATCCCCAGACGAAATCAAGAAGATTCAAACCCACATGAGAGATCACGGTTTTCCTCACCTAATTTTAGGCAATAAACTCATGGACGCCTATCTCAAATGTGGCAGCATTGAGGATGCCTATCAACTGTTCGAAGAAATGCCTCAGAGAAACAGGCATGTTGTTGCTTGGAATGCTTTGATTTCTTCCTATATTAAACAAAAGCGGACTGAAGAAGCTGTGTCTTTGTATAAAAGAATGGCGTTTGACGGAGTTTGTCCTGATGATTTTACCTTGTCCTGTGTTCTTAAGGCGTTTTCGGACCTGGGTTTTATCCGTGAAGGACAGAAAGCTCATGGAAAGACAGTTGTCTTAGGTTTGGAGGTCTCAAATAGGTTTGTTGGGAGTGCCCTTGTTGACATGTATGCTAAGTTTGGTCAGATGAGGAGTGCTCGCTTGATAGCGGATAGATTTGTAGGGAAAGATGTGGTATTGTTTACTGCTTTGATTGCTGGTTATGTGCAGCTTGGGGAAGTTCATGAAGCAATGGAGGCTTTTAGTAGAATGATCAAGGAAGGAGTTACCGCAAATGAATTCACTTTTACAAGTTTATTAGTGAGTTGTGGGAATGTGGAGGATTTGTGCCTTGGCAAATTAATTCATGGTCTACTAATTAAATATGGTTATGACTCTTGTGTCACTCCACAGACCTCACTTCTTACTATGTACACTAAATGTGGTATGGTGGATGATTCTCTTAAGGTTTTTGAGCATCTTGTTAACCCAAGCTCGGTGACATGGACTTCCCTCATAATTGCCCTTGCACAAAATGGCAGAGAAGAAGTTGCTCTCTCGAAATTTCGTGATATGATACGTTGCTCTGTTGTTCCCAATCGTTTCACCTTATCTGGGGCTCTTAGTGCATGCTCTCGCCTCGCAATGTTTGACCAAGGGCTACAAATTCATGCCATCGCAGTGAAATTAAGATTAGACTGTGAAAAGTTCATTGGCGCTGCCCTCATTGATGTGTACGGAAGATGTGGTTTTGTGGAACTTGCTAAGCTGGTTTATGATGGATTATGTACACCTGATGTCGTGCATGTTAACAACATGATGTATGCTTATGCTCAGAATAGCTTTGCAAATGAAACACTAGAATTATTTCACAACATGAGAGACATGGGCCTTGAACGCAATGATGTTACGCTGGTTAATGTTCTATCAGCATGCAACAATGCGGGGTTGGTTGATGAAGGGCGTTGCATCTTTGACTCTCTAAGAAGTTATCATTACATTCATCTCACCAAGGAACACTATGCTTGCATGGTTGACATATATGGACGCGCTGGAAGGCTTCATGAGGCAGAATCACTGATAAATCAAGTTGATAATCCAGATGCTGTTTTATGGAGGACACTGTTGAGTGCCTGCAGGATCCATGGAGAGGTTGCCATGGCAGAGAGAATTATAAACAAGTTAATTGAGCTATCACCAAACGATGATGGGACCTTAGTTCTTTCTTCAAATCTTTATGCATCAACCGGTAATTGGAGGGACGTTATTATTATGAAGTCTTTAATGAGGGATAATAAACTGAAAAAAAGTCCTGCCATGAGCTGGGTCATTATAGACAGAGAGGTTCACACCTTCAAGGCAGGGGATTGCTCACATCCAAGATTTAAGGAGGTAAGTTTCACATTAAAGGAACTTATGGCGAACGTGAGGAAGTTAGGGTATGTTCCAGCTACAAGATTTGTGTTGCAAGACTTGGATAAGAAGGGAAAGGAAAAGTCCTTGTACTACCACAGTGAGAAGCTAGCCATTGCTTTCTCTATATGGAAGACATCTAAGAATACCACTCGCATTACCATTTACAAAAATTTGAGGGTATGTGGGGACTGCCATGCTTGGATTAAGTTTGTTACCAAAGTAGTTGGGAGAGAGATAGTTGCCAGGGATGCAAAAAGATTTCACCATTTTAAGGACGGCACTTGCTCTTGCGGAGATTATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_275710.p1 GENE.S_Transcript_275710~~S_Transcript_275710.p1 ORF type:complete len:728 (+),score=104.94,PPR_2|PF13041.2|0.00041,PPR_2|PF13041.2|2e-12,PPR_2|PF13041.2|4.1e+03,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|54,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|2.8e-05,PPR_2|PF13041.2|6.7,PPR_2|PF13041.2|12,PPR|PF01535.16|0.00025,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|62,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|4.5e+03,PPR|PF01535.16|0.26,PPR|PF01535.16|9.7e-05,PPR|PF01535.16|3.3,PPR|PF01535.16|0.013,PPR|PF01535.16|29,PPR|PF01535.16|0.045,PPR|PF01535.16|3.3,PPR|PF01535.16|1.3e+03,DYW_deaminase|PF14432.2|4.2e-32,PPR_3|PF13812.2|4e+03,PPR_3|PF13812.2|0.00047,PPR_3|PF13812.2|0.89,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|0.00026,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|5.2e+02,PPR_3|PF13812.2|93,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|38,PPR_1|PF12854.3|0.094,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|5.2e+03,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|48,PPR_1|PF12854.3|0.052,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|8.3,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|9.7e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.5e+02,TPR_14|PF13428.2|20,TPR_14|PF13428.2|3.5,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|3.5e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|13,TPR_14|PF13428.2|1.6 S_Transcript_275710:276-2459(+)
MAGFSWLVKGSRNPFSVVRILQKGTHNQTYYIIRNIAISALQIQRYSNHKESSDLYLSLIQQCKSPDEIKKIQTHMRDHGFPHLILGNKLMDAYLKCGSIEDAYQLFEEMPQRNRHVVAWNALISSYIKQKRTEEAVSLYKRMAFDGVCPDDFTLSCVLKAFSDLGFIREGQKAHGKTVVLGLEVSNRFVGSALVDMYAKFGQMRSARLIADRFVGKDVVLFTALIAGYVQLGEVHEAMEAFSRMIKEGVTANEFTFTSLLVSCGNVEDLCLGKLIHGLLIKYGYDSCVTPQTSLLTMYTKCGMVDDSLKVFEHLVNPSSVTWTSLIIALAQNGREEVALSKFRDMIRCSVVPNRFTLSGALSACSRLAMFDQGLQIHAIAVKLRLDCEKFIGAALIDVYGRCGFVELAKLVYDGLCTPDVVHVNNMMYAYAQNSFANETLELFHNMRDMGLERNDVTLVNVLSACNNAGLVDEGRCIFDSLRSYHYIHLTKEHYACMVDIYGRAGRLHEAESLINQVDNPDAVLWRTLLSACRIHGEVAMAERIINKLIELSPNDDGTLVLSSNLYASTGNWRDVIIMKSLMRDNKLKKSPAMSWVIIDREVHTFKAGDCSHPRFKEVSFTLKELMANVRKLGYVPATRFVLQDLDKKGKEKSLYYHSEKLAIAFSIWKTSKNTTRITIYKNLRVCGDCHAWIKFVTKVVGREIVARDAKRFHHFKDGTCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST