Transcript Information: S_Transcript_27582.p1


Annotated TAIR IDAT1G15360.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)SHN1, WIN1
Annotation TypeOrtholog
Chromosome Positionchr1:5283609-5284506 | Forward length=199
E-Value8.4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.959751415829
Replicate 213.72636092992
Replicate 314.658070372634
Condition 2: 8 Hour
Replicate 121.429586035295
Replicate 218.50960766935
Replicate 314.82388750379
Condition 3: 24 Hour
Replicate 121.666993559889
Replicate 215.096903802485
Replicate 316.061595052769


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27582.p1 GENE.S_Transcript_27582~~S_Transcript_27582.p1 ORF type:complete len:614 (+),score=173.47,AP2|PF00847.16|9.4e-09,AP2|PF00847.16|0.0074,AP2|PF00847.16|0.016,AP2|PF00847.16|1.7e+03,AP2|PF00847.16|0.16,AP2|PF00847.16|1.2e+04 S_Transcript_27582:511-2352(+)
ATGAGAAAGTTCAGAGTATTTTGTACAGACCCCGATGCAACAGACTCATCATCAAGTGATGAGGAAGAGCAAAAAAATCATGAGAAAGGAGGAGGAGAAAAACCCAGAAAGTGTTTTTTGAGGGAAGTAACAGTACCAGTGGCCGGAGATTCGCCGGAAAAGGAGCCAACTCCGTCACCGGAGCCGACGGAGGCGAAGAAGTATAGAGGGGTCAGGCAAAGGAAGTGGGGAAAGTGGGCTGCTGAGATTAGAGACCCTATCAACAAGGTCAGGATTTGGTTAGGTACTTTTGATTCTGCTCTAGAAGCTTCTGAGGCTTATAATCTTAAGAAACTTGAATTTGATGCTTACCGTTCTTCTAATACTACTGCTACTATGATTGATAAAGATGTTCATGTTGTTGGTAATGAAGAAAATAATGATTCTAAGGAAAATAAAAGTGAAAGAGTAGAGTCACAACAACAACAACCTGAAACGATAATACATGAGAGGAGAATGAACAAGAAGAGTCAGAGTGTTTGTTGTGGTGTGTTTAGGTTGAAATCTGGTAGATGGGGAGCAAGGATTAGGATTCCTGGCACTGGGGGAAGGCTTTGGTTGGGTAATTTTGACACTTCTGAGGAGGCTTCTAGGGCTTACAGTAAGAAAAAGGTTGAGTTTGATGAGAAGTTTAAGAAGGATAAGGTTGGGAAACTCAAGGTTGGTGAATTTGGTGAGAGGGGTGATAAGGGTAAGGATGTGAAGTCGAAGGTTGGTGAGGAAGGGAGAGTTGTTCCGGCTGGTGTTAAGATGACGAAGGAAGGGAAGTGGGGGGCTCAGATTTGGCACCCTAAGTCGAAGACTAGTGTTTGGCTGGGTACTTATAGTACCCCTGAGGAGGCTGGGATTGCTGTTAGTAAGAAGAGGGAGTTGTTCAAGAAGCGGTTTGGGTTTAGGAAGCGGGTTGAGCCTAATCGTTATGGCTTTTGTGAGGGGAGAGGCCCCGTTGGCTTTGATGATAGGGAGGTTGTGATTGCGTTGGCTGCTCCTATGTCGTATGGTAAGGCTGATGGAGTTAAAGAGAAGGCCACGAGCTTTGATTCTGTTGGAGAAATCAACGGGGGGAAGTATGGTGGTCGTGAGCTTCCTCCTGGTGTTAGGGCGACAAAGACTGGCAGGTGGGGTGCTTGGGTCACTCACCCGGTTTCAGGATCTCATTATTGCTTGCGTTCTTATGCGACCATTGAACAGGCTGCTAAAGCTGTCGACATGAAAATGGCAGAGTTTGGCAGGAAGTTTAAGTCTAAGAAGAGGGCTAGACCTGACAATGAAGCTCCTAGAGGTGTTGAACCGAAATGTACTTTCACTCATGGCTCACCAACATCTGTTTTTGAGGCTGAGAATTCTAATGGTGGGACTGTGAGTGCTCCAGAAAGTGAAGAAGGTGGAGCCAGTGTTGATCAAGCTCAGCAAAACAAGACCACTGAAGAGGCTTCCAGTTCTGTCAGCCGGATGAGGGTAAAGCTTCACAGGAAGTTGGAGTCTAGGAAGGCCGCCAGGCCTGAAATGGGAGTTCCTGGTTCTCTAAAATCAGAATGCGATTTTTCTCGGGGAGCTCCCACCACATTTGTTGAGACAAATACTTCGAATGGCAGGATTGTCAATGCTCCTGCAAGTGAAGGAGTTGGAGCAAGTATCGATCAAAATCGAAAAAGCCCCCTTGGCATCTCAAGTTTTGAGGGTGCTGCCACATTGGATGTCATCAATGAGTATGGGCAACTCCAGGGTGTGTATAGCAGGCTGGATGATGATCTCTGGTTTAGCGATCCTGATGACAACGACAAGAGCACAAGGTTCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27582.p1 GENE.S_Transcript_27582~~S_Transcript_27582.p1 ORF type:complete len:614 (+),score=173.47,AP2|PF00847.16|9.4e-09,AP2|PF00847.16|0.0074,AP2|PF00847.16|0.016,AP2|PF00847.16|1.7e+03,AP2|PF00847.16|0.16,AP2|PF00847.16|1.2e+04 S_Transcript_27582:511-2352(+)
MRKFRVFCTDPDATDSSSSDEEEQKNHEKGGGEKPRKCFLREVTVPVAGDSPEKEPTPSPEPTEAKKYRGVRQRKWGKWAAEIRDPINKVRIWLGTFDSALEASEAYNLKKLEFDAYRSSNTTATMIDKDVHVVGNEENNDSKENKSERVESQQQQPETIIHERRMNKKSQSVCCGVFRLKSGRWGARIRIPGTGGRLWLGNFDTSEEASRAYSKKKVEFDEKFKKDKVGKLKVGEFGERGDKGKDVKSKVGEEGRVVPAGVKMTKEGKWGAQIWHPKSKTSVWLGTYSTPEEAGIAVSKKRELFKKRFGFRKRVEPNRYGFCEGRGPVGFDDREVVIALAAPMSYGKADGVKEKATSFDSVGEINGGKYGGRELPPGVRATKTGRWGAWVTHPVSGSHYCLRSYATIEQAAKAVDMKMAEFGRKFKSKKRARPDNEAPRGVEPKCTFTHGSPTSVFEAENSNGGTVSAPESEEGGASVDQAQQNKTTEEASSSVSRMRVKLHRKLESRKAARPEMGVPGSLKSECDFSRGAPTTFVETNTSNGRIVNAPASEGVGASIDQNRKSPLGISSFEGAATLDVINEYGQLQGVYSRLDDDLWFSDPDDNDKSTRFF*

Click here to download the sequence:
Link to NCBI Protein BLAST