Transcript Information: S_Transcript_275913.p1


Annotated TAIR IDAT5G37570.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14924494-14926146 | Reverse length=550
E-Value1.8E-205
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.299368957233
Replicate 21.3165859952947
Replicate 31.2673127869382
Condition 2: 8 Hour
Replicate 13.3549890734007
Replicate 23.2768892220938
Replicate 33.6233086344815
Condition 3: 24 Hour
Replicate 10.86905503940881
Replicate 21.188518147765
Replicate 31.5507224408209


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_275913.p1 GENE.S_Transcript_275913~~S_Transcript_275913.p1 ORF type:complete len:553 (+),score=71.67,PPR|PF01535.16|3.3,PPR|PF01535.16|0.15,PPR|PF01535.16|0.01,PPR|PF01535.16|6.3e-09,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|13,PPR|PF01535.16|0.013,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.0027,PPR|PF01535.16|15,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|3.5e+02,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|8.8,PPR_2|PF13041.2|0.00054,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|0.00046,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|7.8e+02,PPR_2|PF13041.2|0.072,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|4.3e+02,PPR_2|PF13041.2|3.6e+03,PPR_1|PF12854.3|8.7,PPR_1|PF12854.3|5e+03,PPR_1|PF12854.3|2,PPR_1|PF12854.3|0.076,PPR_1|PF12854.3|9.6e-07,PPR_1|PF12854.3|4.1e-05,PPR_1|PF12854.3|0.047,PPR_1|PF12854.3|0.51,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.0042,PPR_1|PF12854.3|21,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|0.006,PPR_3|PF13812.2|0.0094,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|17,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|55,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|1.5e+03 S_Transcript_275913:76-1734(+)
ATGAAGTACCCTTTACATTCACCGTTATTTACACCCTCTTTACCGCCCATTGCCACCCTTCTCAAGTCATGCAAGACACGTCGATGTCTCGAGCAAGTCCACGCTCACATCATTTGCAAAGGCCTTCACCATGACAACTACTTGATCTCCCGTTTTGTATCTTGCTGTAACTCTCCTTCTCTTCTCCCTTACATTACGTCAGTTTTCAACGTTGTCTCTTACCCCAACACTTGCCTTTGGAATTCCCTATTGAAGGCTCATTGTGAATACTCTTCTCTCTGTAATTCTTTATCCCTTTTTTTCTCTATGAGAGTTTCCCCTGATATTGATTTAGATAAGTATACTTTCCCTTCTTTAATTAAGTGTTGTTCTAATGAGCTGGTGGTCTGGGTTGGTTTGGGGGTTCATGGGTTGGTGCTTAAGTATGGGATTGAGAATGATGTGTTTGTGGGTTCAAGTTTGATTGATTTCTATGGGAAATGTAAATTAGCTGGGTATGCCCAGAAGATGTTTGATGAAATGTCTATGAGAAATGTTGTTTCTTGGACTACTTTGCTTGTGGCTTATGTTAATATTGGGGACTTGGGTAATGCGAGGAACGTGTTTGATACAATGCCTAAGAGAAATAGAGTGTCATGGAATGCTATGATTAGTGGGTATACCAAACTAGGGGATTTGGATAATGCGCGCATGTTGTTTGATGAAATGCCTTGCAAAAATGTTGTTTCATATACTGTGATGATTGATGGGTATGCCAAATGTGGTGACATGGGCTCGGCGAGGTTTTTGTTTGAGCAATGCACAGAGAAGGATATGTTCCTATGGTCAGCTTTGATATCAGGGTATTCACAGAATGGGATGCCTAATGAGGCTGTGAAATCGTTTCTCGAAATGGGACGAAGTAATGTTAAGGCTGATGAATTTATAATGGTGAGTGTAATGTCAGCTTGTGCTCAATTAGGCCATTTGGATATGGCTAAGTGGGTTGATTCATATATGAGTAGGAGCTCATTTGATCTTCATAGTGTTCATGTGGCTGCAGCATTGGTTGATATGAATGTGAAATGTGGTAACGTGGAGAGGGCGTTGGAGTTATTCAATAATATGCCTAAGCGAGATTTAGTTTCATACTGCTCTATGATTCAAGGCCTTGCTATTCATGGTAAAGGCGCTGATTCGGTTAAGATGTTTAATAACATGATTTCAGAAGGGATAACCCCAGATGATGTGGCCTTCACCATCATCCTGACTGCTTGCAGTCATGCTGGGCTAGTCGAGGAAGCTTACTGCTTTTTTGGTATGATGAGGAACAACTATTCTATCGCCCCATCACCTGATCATTATGCTTGTGTTGTTGATCTTCTAGGCCGTTTTGGGCACCTTAAAGCTGCGTACAATTTATTAAAGTTAATGCCTGTTGAGCTCCATGCTGGTGCCTGGGGGGCGCTTCTTGGGGCGTGTAGATTGCATTGTGATGCTGAGTTAGCTGAAGTAGTGGCCAACCGATTGGTTGAAGTTGAGCCGAGTAATGCAGGAAATTTTGTTCTGTTGTCTAATATCTATGCGTCAGCAGATCGTTGGCTGGATGTTTCTATTTTGAGAGATCAGATGATAGATCGAGGGCTTAAGAAAATACCAGGTCGTAGTTGGATTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_275913.p1 GENE.S_Transcript_275913~~S_Transcript_275913.p1 ORF type:complete len:553 (+),score=71.67,PPR|PF01535.16|3.3,PPR|PF01535.16|0.15,PPR|PF01535.16|0.01,PPR|PF01535.16|6.3e-09,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|13,PPR|PF01535.16|0.013,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.0027,PPR|PF01535.16|15,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|3.5e+02,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|8.8,PPR_2|PF13041.2|0.00054,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|0.00046,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|7.8e+02,PPR_2|PF13041.2|0.072,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|4.3e+02,PPR_2|PF13041.2|3.6e+03,PPR_1|PF12854.3|8.7,PPR_1|PF12854.3|5e+03,PPR_1|PF12854.3|2,PPR_1|PF12854.3|0.076,PPR_1|PF12854.3|9.6e-07,PPR_1|PF12854.3|4.1e-05,PPR_1|PF12854.3|0.047,PPR_1|PF12854.3|0.51,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.0042,PPR_1|PF12854.3|21,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|0.006,PPR_3|PF13812.2|0.0094,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|17,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|55,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|1.5e+03 S_Transcript_275913:76-1734(+)
MKYPLHSPLFTPSLPPIATLLKSCKTRRCLEQVHAHIICKGLHHDNYLISRFVSCCNSPSLLPYITSVFNVVSYPNTCLWNSLLKAHCEYSSLCNSLSLFFSMRVSPDIDLDKYTFPSLIKCCSNELVVWVGLGVHGLVLKYGIENDVFVGSSLIDFYGKCKLAGYAQKMFDEMSMRNVVSWTTLLVAYVNIGDLGNARNVFDTMPKRNRVSWNAMISGYTKLGDLDNARMLFDEMPCKNVVSYTVMIDGYAKCGDMGSARFLFEQCTEKDMFLWSALISGYSQNGMPNEAVKSFLEMGRSNVKADEFIMVSVMSACAQLGHLDMAKWVDSYMSRSSFDLHSVHVAAALVDMNVKCGNVERALELFNNMPKRDLVSYCSMIQGLAIHGKGADSVKMFNNMISEGITPDDVAFTIILTACSHAGLVEEAYCFFGMMRNNYSIAPSPDHYACVVDLLGRFGHLKAAYNLLKLMPVELHAGAWGALLGACRLHCDAELAEVVANRLVEVEPSNAGNFVLLSNIYASADRWLDVSILRDQMIDRGLKKIPGRSWIH*

Click here to download the sequence:
Link to NCBI Protein BLAST