Transcript Information: S_Transcript_276042.p1


Annotated TAIR IDAT2G32950.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)COP1, ATCOP1, DET340, FUS1, EMB168
Annotation TypeOrtholog
Chromosome Positionchr2:13978000-13983282 | Forward length=675
E-Value7.2E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.415774486044
Replicate 226.086820357313
Replicate 321.690513507128
Condition 2: 8 Hour
Replicate 18.7179268592053
Replicate 28.8643173855521
Replicate 39.7865212274443
Condition 3: 24 Hour
Replicate 132.149073816346
Replicate 231.928891780515
Replicate 326.808336506067


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_276042.p1 GENE.S_Transcript_276042~~S_Transcript_276042.p1 ORF type:3prime_partial len:159 (-),score=17.33,zf-C3HC4_3|PF13920.2|5.8e-09,zf-C3HC4|PF00097.21|1.2e-08,zf-C3HC4_2|PF13923.2|1.5e-07,zf-RING_2|PF13639.2|2.2e-06,zf-RING_5|PF14634.2|6.2e-06 S_Transcript_276042:1-474(-)
ATGGAGGAAACCTCAACTGGAGCTCTAGTGCCGGCGGTGAAATCGGAGCTCAAGTCGTTATCGACGACCATGACGACTCCGGGACCGGAATCTCTCGCCGTTGAATCTCCGGAATCGCCGTCTGACGGTGATAGAGATTTGATGTGTCCGATTTGTATGCAGTTCATTAAAGACGCTTTTCTAACAGCTTGTGGTCATAGTTTCTGTTATATGTGTATTATCACTCATCTTCGTAACAAGAATGATTGTCCTTGTTGTGGTCGTCATCTTACCAGTAATCAGCTCTTCCCTAATTTCCTCCTCGATAAGCTACTGAAGAAGGCATCAGCTCGTCAGGTGTCGAAAAGTGCGTCTCCGATTGAGCAGTTTCGTCGTGCCTTACAGCAGGGTTATGAAGTATCAGTCAAGGAGGTAGATACCCTTATGTCACTTCTTGCGGAGAAGAAGAGAAAGATGGAGCAAGAAGAGGCCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_276042.p1 GENE.S_Transcript_276042~~S_Transcript_276042.p1 ORF type:3prime_partial len:159 (-),score=17.33,zf-C3HC4_3|PF13920.2|5.8e-09,zf-C3HC4|PF00097.21|1.2e-08,zf-C3HC4_2|PF13923.2|1.5e-07,zf-RING_2|PF13639.2|2.2e-06,zf-RING_5|PF14634.2|6.2e-06 S_Transcript_276042:1-474(-)
MEETSTGALVPAVKSELKSLSTTMTTPGPESLAVESPESPSDGDRDLMCPICMQFIKDAFLTACGHSFCYMCIITHLRNKNDCPCCGRHLTSNQLFPNFLLDKLLKKASARQVSKSASPIEQFRRALQQGYEVSVKEVDTLMSLLAEKKRKMEQEEAE

Click here to download the sequence:
Link to NCBI Protein BLAST