Transcript Information: S_Transcript_27635.p1


Annotated TAIR IDAT5G15800.2
Annotated Gene NameK-box region and MADS-box transcription factor family protein
Annotated Gene Symbol(s)SEP1, AGL2
Annotation TypeHomolog
Chromosome Positionchr5:5151594-5153767 | Reverse length=262
E-Value3E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2362768992685
Replicate 213.497235964597
Replicate 314.428728818346
Condition 2: 8 Hour
Replicate 118.691077395605
Replicate 229.346601450935
Replicate 319.184262844483
Condition 3: 24 Hour
Replicate 111.56493831855
Replicate 212.931704252386
Replicate 38.3084381569794


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27635.p1 GENE.S_Transcript_27635~~S_Transcript_27635.p1 ORF type:complete len:170 (+),score=24.59,SRF-TF|PF00319.14|8.2e-27,K-box|PF01486.13|4.5e-07 S_Transcript_27635:413-922(+)
ATGGGAAGGAGAAAGATACAGATGAAGAGGATCGAAGATAAGAGCAGCCGTCAAGTCACTTTCTCGAAAAGAAGGTCTGGACTTATCAAGAAAGCTCGTGAACTCTCTGTGCTTTGCGATGTTGAGGTTGCTCTTATCGTCTTCTCTAGCCGTGGTCGCCTCTACGAATTCTGTAGCAGCTCTACTTCCAGTCTGTCTCAGGTTCTTAGGCGTTACCAAGCTAATACTGCACTGAGCGGACATGCATCAACTGGAACCAGTGAAGTAGAGAATCCTCCTCAATCCAGTTACTCAGACATCCAGACATGTACTGAACTAGTGAAAACAGTTAAAAGGTGTCTAGATGGCCAGGAGCAGGCTAACTTGTACGACTTTGTACAGCTTGAGAAACAACTTGATGCAGCTCTGTCACAAACTAGAACACGGAAGACAGAACTGATGCTACAGTCTACGATGTCTCTTCAGAAGCAGGTAAGTTGTTTCTCCCTCTTTAAATTGTCCACAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27635.p1 GENE.S_Transcript_27635~~S_Transcript_27635.p1 ORF type:complete len:170 (+),score=24.59,SRF-TF|PF00319.14|8.2e-27,K-box|PF01486.13|4.5e-07 S_Transcript_27635:413-922(+)
MGRRKIQMKRIEDKSSRQVTFSKRRSGLIKKARELSVLCDVEVALIVFSSRGRLYEFCSSSTSSLSQVLRRYQANTALSGHASTGTSEVENPPQSSYSDIQTCTELVKTVKRCLDGQEQANLYDFVQLEKQLDAALSQTRTRKTELMLQSTMSLQKQVSCFSLFKLSTR*

Click here to download the sequence:
Link to NCBI Protein BLAST