Transcript Information: S_Transcript_276627.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value6E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44355002058634
Replicate 21.2869960575217
Replicate 30.15368946736334
Condition 2: 8 Hour
Replicate 11.4216926878089
Replicate 20.93216035998861
Replicate 31.7763206337485
Condition 3: 24 Hour
Replicate 10.54612208726485
Replicate 20.37773019293912
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_276627.p1 GENE.S_Transcript_276627~~S_Transcript_276627.p1 ORF type:complete len:120 (+),score=27.28,Skp1|PF01466.15|2.7e+03,Skp1|PF01466.15|6.3e-27,Skp1_POZ|PF03931.11|2.3e-09,Skp1_POZ|PF03931.11|4.9e+03,Skp1_POZ|PF03931.11|1.7e+03 S_Transcript_276627:140-499(+)
ATGATCGAAGACGATTGCGCTAACATCATCATTCCACTCCCTAACATCACCTCTCAAACCCTAGTCAAGGTCATTGAGTACATGAAGAAACATGCACAAGGGTTGGGTTCGAGCTCGGGTCCGGGTTCGGGTTCGGATGAAGTTGTCGATGATGAAGATGTGATGAAGAAGTGGGACAAACATTTTGTAGAAGTGGAGCAGAATATGCTATTTGATTTGATATTGGCTGCTGATTATTTGGATATTAAGGGACTTGTTGACTTGACTTGTCAAACTGTGGCTGATATGATTAAGGGTAAGACTCCTGAGGAGATTAGGAAGACTTTTATAAATGTGGACCAGAATATGCTCATACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_276627.p1 GENE.S_Transcript_276627~~S_Transcript_276627.p1 ORF type:complete len:120 (+),score=27.28,Skp1|PF01466.15|2.7e+03,Skp1|PF01466.15|6.3e-27,Skp1_POZ|PF03931.11|2.3e-09,Skp1_POZ|PF03931.11|4.9e+03,Skp1_POZ|PF03931.11|1.7e+03 S_Transcript_276627:140-499(+)
MIEDDCANIIIPLPNITSQTLVKVIEYMKKHAQGLGSSSGPGSGSDEVVDDEDVMKKWDKHFVEVEQNMLFDLILAADYLDIKGLVDLTCQTVADMIKGKTPEEIRKTFINVDQNMLIL*

Click here to download the sequence:
Link to NCBI Protein BLAST