Transcript Information: S_Transcript_276695.p1


Annotated TAIR IDAT5G20190.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6814093-6815171 | Forward length=290
E-Value6E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.248896718813
Replicate 217.096274159286
Replicate 313.73225370727
Condition 2: 8 Hour
Replicate 118.463541400115
Replicate 211.621739553105
Replicate 310.427232811095
Condition 3: 24 Hour
Replicate 123.547082204147
Replicate 220.309129854129
Replicate 327.733330211686


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_276695.p1 GENE.S_Transcript_276695~~S_Transcript_276695.p1 ORF type:5prime_partial len:231 (-),score=55.16,TPR_17|PF13431.2|0.00015,TPR_17|PF13431.2|0.07,TPR_17|PF13431.2|0.39,TPR_16|PF13432.2|0.015,TPR_16|PF13432.2|3e-07,TPR_16|PF13432.2|0.021,TPR_12|PF13424.2|0.035,TPR_12|PF13424.2|5e-07,TPR_12|PF13424.2|0.04,TPR_14|PF13428.2|0.43,TPR_14|PF13428.2|0.069,TPR_14|PF13428.2|0.083,TPR_19|PF14559.2|1.4e-05,TPR_19|PF14559.2|0.065,TPR_11|PF13414.2|0.0035,TPR_11|PF13414.2|0.00062,TPR_1|PF00515.24|11,TPR_1|PF00515.24|0.18,TPR_1|PF00515.24|1.5,TPR_2|PF07719.13|62,TPR_2|PF07719.13|0.7,TPR_2|PF07719.13|0.43 S_Transcript_276695:70-762(-)
ACCACCCTCACAACTTCTTCTAATACTTCTCCTTGTCACTCTCCCACCCACCAATCAAAACTTGCCACGCGTACTCTTTCCGACGCCGACCTCCGTCCTCACACCACCACGCGCCTCCAACGCCTCTTCTCAAGCTCCGGCCCTGCCGAGGAGGAGGTGAGAAAGAAGATGGAGTTGGCTACGTTGGTCGAAGGCGGCGGCTGGGGCGGTGGTGGCAGAAGTGGTGGTTGTTGCGGTGGTGGTGGTGGTGGCTCAGAGTTTCATGAGTATGGTAATAGTAGTAATGAGCATGAGAGTGTTGAAGCTTATTATCAGAAAATGATCAAGGCTAATCCTGGAAATGCACTCTTGCTTGGTAATTATGCTAGGTTCTTGAAAGAGGAACGTGGAGATTTAGCTAAAGCAGAGGAGTATTGTGGAAGAGCAATTTTAAACAACCCAGGAGATGCAAATTTGCTATCCCTCTATGCTGATATCATTTGGCAAACCCAAAAGGATGTTCAGCGTGCTGAGAGCTACTTTGATCAGGCTGTTAAAACTGCTCCCGATGACTCGTATGTTTATGCATCATACGCAAAATTTCTATGGGATATGGAAGATGAGGAGGAACAAGAGGAAAGACAACATGACAAATTTGGAAACCCAAGTACATCACCTCCAAAATATTGGGAAGGAACACCTAATCAACTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_276695.p1 GENE.S_Transcript_276695~~S_Transcript_276695.p1 ORF type:5prime_partial len:231 (-),score=55.16,TPR_17|PF13431.2|0.00015,TPR_17|PF13431.2|0.07,TPR_17|PF13431.2|0.39,TPR_16|PF13432.2|0.015,TPR_16|PF13432.2|3e-07,TPR_16|PF13432.2|0.021,TPR_12|PF13424.2|0.035,TPR_12|PF13424.2|5e-07,TPR_12|PF13424.2|0.04,TPR_14|PF13428.2|0.43,TPR_14|PF13428.2|0.069,TPR_14|PF13428.2|0.083,TPR_19|PF14559.2|1.4e-05,TPR_19|PF14559.2|0.065,TPR_11|PF13414.2|0.0035,TPR_11|PF13414.2|0.00062,TPR_1|PF00515.24|11,TPR_1|PF00515.24|0.18,TPR_1|PF00515.24|1.5,TPR_2|PF07719.13|62,TPR_2|PF07719.13|0.7,TPR_2|PF07719.13|0.43 S_Transcript_276695:70-762(-)
TTLTTSSNTSPCHSPTHQSKLATRTLSDADLRPHTTTRLQRLFSSSGPAEEEVRKKMELATLVEGGGWGGGGRSGGCCGGGGGGSEFHEYGNSSNEHESVEAYYQKMIKANPGNALLLGNYARFLKEERGDLAKAEEYCGRAILNNPGDANLLSLYADIIWQTQKDVQRAESYFDQAVKTAPDDSYVYASYAKFLWDMEDEEEQEERQHDKFGNPSTSPPKYWEGTPNQL*

Click here to download the sequence:
Link to NCBI Protein BLAST