Transcript Information: S_Transcript_2768.p1


Annotated TAIR IDAT2G21950.1
Annotated Gene NameSKP1 interacting partner 6
Annotated Gene Symbol(s)SKIP6
Annotation TypeOrtholog
Chromosome Positionchr2:9353526-9354644 | Reverse length=372
E-Value2.8E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.342493371018
Replicate 210.45629836849
Replicate 311.362823179469
Condition 2: 8 Hour
Replicate 114.654889080494
Replicate 212.458256943924
Replicate 312.122756931743
Condition 3: 24 Hour
Replicate 110.767146365032
Replicate 210.741142927179
Replicate 38.6065743941628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2768.p1 GENE.S_Transcript_2768~~S_Transcript_2768.p1 ORF type:5prime_partial len:422 (+),score=79.11,Kelch_1|PF01344.21|2.7e-10,Kelch_1|PF01344.21|1.6e-10,Kelch_1|PF01344.21|6.5,Kelch_1|PF01344.21|8.4e+02,Kelch_1|PF01344.21|7.3e+02,Kelch_1|PF01344.21|86,Kelch_6|PF13964.2|1.5e+03,Kelch_6|PF13964.2|9.4e-11,Kelch_6|PF13964.2|0.00084,Kelch_6|PF13964.2|9.1e+03,Kelch_6|PF13964.2|1.2e+03,Kelch_6|PF13964.2|2.3e+03,Kelch_4|PF13418.2|1.3e-07,Kelch_4|PF13418.2|0.00035,Kelch_4|PF13418.2|2.8e+02,Kelch_2|PF07646.11|2.3e+03,Kelch_2|PF07646.11|5.5e+03,Kelch_2|PF07646.11|9.7e-08,Kelch_2|PF07646.11|0.0015,Kelch_2|PF07646.11|73,Kelch_2|PF07646.11|11,Kelch_2|PF07646.11|3e+02,Kelch_3|PF13415.2|4.4e+03,Kelch_3|PF13415.2|0.0002,Kelch_3|PF13415.2|7,Kelch_3|PF13415.2|6.3e+03,F-box|PF00646.29|3.3e-06 S_Transcript_2768:1-1266(+)
CAAACCAGTCGTCAATCATCAGACTCATCACCCATTTCCATCTCCCTCCCAAACAATCAACCATTTCTATCATCCCACTACAATTTCCAGCTCTCAGCCATGTCCAACAACCACCAATCCACAACCCCAGATGAAGATCCAATCACCACCACCAGCATCACCAACAACAACCAATACCTCATCCCAAACCTCCCAAACGACGTCGCATTACAATGCCTAGCTAGAGTCCCTCACTCCCACCACCCCTTTCTTTCCCTTGTTTCCAAATCATGGCACTACACTCTTCTGTCTCCTCACTTCCACGCCACTCGCCTTGCACTCAACTCCACCCAAAACTTCCTCTTCTTCAACATTCGTGTCTTCAACCCTAAAGACTCCACCTTTACTTTCCAGTGGTACTCTCTTGACCCATCTATGAAAACCCCCAAATTTCCCAAAACTAATCACTACCCACTTAATTTAATCCCAATTAAACCTTGCCCATCTCAACCAATTGGGGCTTCCTTTGTCTCTTTGGGTCATAGGCTTTACATCATTGGTGGGTCTATTGGTGATATTCCTAGCAATAAAATGTGGGTTTTTGATTTTGTGTCAAATAAGTGGGATTTAGGGCCTAGGATGAGGGTAGGGAGGGAATTTGCTGCTTGTGGGGTGATTGATGGGAAGATATATGTGTTGGGAGGTTGTGTGGTGGATAATTGGGCTAGGTCTATGAATTGGGCTGAGGTTTTTGACCCTGGTTCAGGCTCATGGGCCGCGGTCCCTAGCCCAGTTGAGAGTAGGGAGAAGTGGATGCATGCTAGTGGGGTTGTTGGGGGGAAGATTTATGCTATGGCTGATAGGGGAGGGGTGGTTTTCGAGCCAGGATCCGGGGATTGGGGGCCGGTTTCGGTTGTGCTTGACTTGGGGTGGAGGGGGAGGGCAGCTGTGGTGGATGAGGTGTTGTATTGTTATGATTATTTGGGGAAGATAAGAGGTTTTGATTTCAAGGATAACGTGTGGAAGGAGTTGAAAGGGTTGGACAAGGATTTGCCGAAGTTCTTGTGTGGGGCTACCATGGCTAATGTGGGTGGGAGGTTGTTTGTGGTGTGGGAAGGGAAAGGGAATGGGAGTGGGAATGGGAAGGAGATGGAGGTGCATTGTGCAGAGATTGTGGTTAGGAAGGACGGTTGTGGAGATTTGTGTGGTTCAATTTTGTGGTCGGATGTGATCATTGTGGTTCCCAAAGGTTCCTCAATTGTACATTGCCTGGACGTTTGTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2768.p1 GENE.S_Transcript_2768~~S_Transcript_2768.p1 ORF type:5prime_partial len:422 (+),score=79.11,Kelch_1|PF01344.21|2.7e-10,Kelch_1|PF01344.21|1.6e-10,Kelch_1|PF01344.21|6.5,Kelch_1|PF01344.21|8.4e+02,Kelch_1|PF01344.21|7.3e+02,Kelch_1|PF01344.21|86,Kelch_6|PF13964.2|1.5e+03,Kelch_6|PF13964.2|9.4e-11,Kelch_6|PF13964.2|0.00084,Kelch_6|PF13964.2|9.1e+03,Kelch_6|PF13964.2|1.2e+03,Kelch_6|PF13964.2|2.3e+03,Kelch_4|PF13418.2|1.3e-07,Kelch_4|PF13418.2|0.00035,Kelch_4|PF13418.2|2.8e+02,Kelch_2|PF07646.11|2.3e+03,Kelch_2|PF07646.11|5.5e+03,Kelch_2|PF07646.11|9.7e-08,Kelch_2|PF07646.11|0.0015,Kelch_2|PF07646.11|73,Kelch_2|PF07646.11|11,Kelch_2|PF07646.11|3e+02,Kelch_3|PF13415.2|4.4e+03,Kelch_3|PF13415.2|0.0002,Kelch_3|PF13415.2|7,Kelch_3|PF13415.2|6.3e+03,F-box|PF00646.29|3.3e-06 S_Transcript_2768:1-1266(+)
QTSRQSSDSSPISISLPNNQPFLSSHYNFQLSAMSNNHQSTTPDEDPITTTSITNNNQYLIPNLPNDVALQCLARVPHSHHPFLSLVSKSWHYTLLSPHFHATRLALNSTQNFLFFNIRVFNPKDSTFTFQWYSLDPSMKTPKFPKTNHYPLNLIPIKPCPSQPIGASFVSLGHRLYIIGGSIGDIPSNKMWVFDFVSNKWDLGPRMRVGREFAACGVIDGKIYVLGGCVVDNWARSMNWAEVFDPGSGSWAAVPSPVESREKWMHASGVVGGKIYAMADRGGVVFEPGSGDWGPVSVVLDLGWRGRAAVVDEVLYCYDYLGKIRGFDFKDNVWKELKGLDKDLPKFLCGATMANVGGRLFVVWEGKGNGSGNGKEMEVHCAEIVVRKDGCGDLCGSILWSDVIIVVPKGSSIVHCLDVCL*

Click here to download the sequence:
Link to NCBI Protein BLAST