Transcript Information: S_Transcript_276966.p1


Annotated TAIR IDAT5G10380.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)RING1, ATRING1
Annotation TypeOrtholog
Chromosome Positionchr5:3267819-3268724 | Forward length=301
E-Value2.7E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61711307212013
Replicate 21.1511020638703
Replicate 30.4811148543548
Condition 2: 8 Hour
Replicate 11.1126290600243
Replicate 20.58361344277548
Replicate 30.49428052417348
Condition 3: 24 Hour
Replicate 10.063318502871288
Replicate 20.19707662240302
Replicate 30.21932212526188


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_276966.p1 GENE.S_Transcript_276966~~S_Transcript_276966.p1 ORF type:5prime_partial len:345 (+),score=11.68,zf-RING_2|PF13639.2|1.6e-14,zf-RING_11|PF17123.1|1.6e-12,zf-RING_11|PF17123.1|8e+02,zf-rbx1|PF12678.3|2.2e-07,zf-RING_5|PF14634.2|1e-06,zf-C3HC4|PF00097.21|3.2e-06,zf-C3HC4_2|PF13923.2|7.8e-06 S_Transcript_276966:3-1037(+)
GATCTTATCTCCACCACCCTCTCAAGTATCACAATTCTCATTTTTCCTTTTTCTTTAGAGATGTTGATCCAAAATAAAAGCCATAGCCTTAGTTTCCTCATCTTCCTTTTCCTCACCCTGGAGCTTGGGCTGCCAATTACTGTGACGGCCCAAGCAGACTTTGACCTGAATACTAGAAACTTATCTCCAGCCACAATAGTTATAATTATTATTGGCGTTATATTCATCCTCACCGGATTCCTCGCCGTCTTCCTCCGTCAATTCTCAGCCGGTTGTTTCGGTCTAAACGTGGTCACCAACCCCGCCTTCCCAACCACCGGTCTCCCGAGGCGTGGGCTTGACCCGGAAGCAATCAAGTCACTCCCGACTTACTTCTACTCGGACGTTAAACAGCACCGTAAGGGAAAGGTGGAGCTAGAATGCGCCGTGTGCTTAAGCGAGTTTCAAGATTCCGAGGCCTTGAGGCTCTTGCCAGGATGTAGTCACGTGTTTCACCCACGTTGTATTGACACTTGGCTTGCATCTCACGTGACCTGCCCTGTTTGTAGGCAGACCTTGGAGCCTGGATCAGGTGCGGACAAGCCCACTGCTACTAATACTATCATTAGCATCCCTCTCACTGGTAGTGAATCTGATGTCCCAGATCAATCTTTAGAGCGTGATCATCACCAACAACATCATAATGATGATAATGTTGGGGGTTATAAATCAGCAGGTGAGGGTGATGAAAAAGAAATGAAGAGGATTGTGAGAAAGTTTCCAAGGTCACATTCAACGGGTCACTCATTGGCTGGTTCAGATAGGTTCACGCTAAGATTACCTGACGATGTACGGACAAATCTGGCGAACCGGTCTGGAGATACGTTGACTGTTATGCCAAGCCCAAGATGCGGTTGGTTTTCTATGACCCCGCCTATTATTTTTCCCCGGACCAGTTCGATTCGGTCTCCACTTCAAGCCGGTTTAAATATTCCGGGTTTTAAGAAGCAGCCTCAATCACCGGTTAAAACATCTGAGCGTCTGTGGCCTATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_276966.p1 GENE.S_Transcript_276966~~S_Transcript_276966.p1 ORF type:5prime_partial len:345 (+),score=11.68,zf-RING_2|PF13639.2|1.6e-14,zf-RING_11|PF17123.1|1.6e-12,zf-RING_11|PF17123.1|8e+02,zf-rbx1|PF12678.3|2.2e-07,zf-RING_5|PF14634.2|1e-06,zf-C3HC4|PF00097.21|3.2e-06,zf-C3HC4_2|PF13923.2|7.8e-06 S_Transcript_276966:3-1037(+)
DLISTTLSSITILIFPFSLEMLIQNKSHSLSFLIFLFLTLELGLPITVTAQADFDLNTRNLSPATIVIIIIGVIFILTGFLAVFLRQFSAGCFGLNVVTNPAFPTTGLPRRGLDPEAIKSLPTYFYSDVKQHRKGKVELECAVCLSEFQDSEALRLLPGCSHVFHPRCIDTWLASHVTCPVCRQTLEPGSGADKPTATNTIISIPLTGSESDVPDQSLERDHHQQHHNDDNVGGYKSAGEGDEKEMKRIVRKFPRSHSTGHSLAGSDRFTLRLPDDVRTNLANRSGDTLTVMPSPRCGWFSMTPPIIFPRTSSIRSPLQAGLNIPGFKKQPQSPVKTSERLWPI*

Click here to download the sequence:
Link to NCBI Protein BLAST