Transcript Information: S_Transcript_276977.p1


Annotated TAIR IDAT3G62140.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23007277-23008626 | Forward length=214
E-Value3.2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.47446859263473
Replicate 30.99154495073121
Condition 2: 8 Hour
Replicate 11.6051369055907
Replicate 21.2027875612756
Replicate 30.68760798725746
Condition 3: 24 Hour
Replicate 11.1744561016449
Replicate 20
Replicate 30.54240955709927


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_276977.p1 GENE.S_Transcript_276977~~S_Transcript_276977.p1 ORF type:complete len:93 (+),score=19.05,Nefa_Nip30_N|PF10187.5|5.3e-09 S_Transcript_276977:117-395(+)
ATGAGTTTATGCCTACTTCAACACTTGACCATCCCAAACCCCCACTGCTGCAACTGCAACTGCAACATTACCTTGTCGTTCTCCTTTTGGAAATTGCAGATTTTGCAGGAGAACAAGGACAAGAAAGATGCTGAGTTCAACGAAAGATTCAAGCATCGACCTCCCAAGGCTTTGGATGAGGATGAGACTGAATTCCTAGAAAAATTGGAGACGGCCAAATTTTTGATATGGAGTAAGGAACGTTACATCTTCAAGGGAGTTGTCAAGGAAAGAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_276977.p1 GENE.S_Transcript_276977~~S_Transcript_276977.p1 ORF type:complete len:93 (+),score=19.05,Nefa_Nip30_N|PF10187.5|5.3e-09 S_Transcript_276977:117-395(+)
MSLCLLQHLTIPNPHCCNCNCNITLSFSFWKLQILQENKDKKDAEFNERFKHRPPKALDEDETEFLEKLETAKFLIWSKERYIFKGVVKERI*

Click here to download the sequence:
Link to NCBI Protein BLAST