Transcript Information: S_Transcript_27743.p1


Annotated TAIR IDAT5G56680.1
Annotated Gene NameClass II aminoacyl-tRNA and biotin synthetases superfamily protein
Annotated Gene Symbol(s)SYNC1, EMB2755, SYNC1 ARATH
Annotation TypeOrtholog
Chromosome Positionchr5:22936645-22938841 | Forward length=572
E-Value3.4e-316
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 171.621655955731
Replicate 273.852285045155
Replicate 378.106605097915
Condition 2: 8 Hour
Replicate 167.605228601858
Replicate 262.444931904921
Replicate 360.694071338394
Condition 3: 24 Hour
Replicate 168.140706747853
Replicate 266.361230738463
Replicate 370.887219538589


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27743.p1 GENE.S_Transcript_27743~~S_Transcript_27743.p1 ORF type:complete len:570 (+),score=134.22,tRNA-synt_2|PF00152.16|3.7e-13,tRNA-synt_2|PF00152.16|3.2e-59,tRNA_anti-codon|PF01336.21|6.1e-12,tRNA_anti-codon|PF01336.21|2.6e+03,WHEP-TRS|PF00458.16|2e-06 S_Transcript_27743:133-1842(+)
ATGACAGAACAACAGCTCTCATCCCCACCAGTGGCAGAGATGTCAGCCGCAACCCTCAACGACACAACCACAATCCAAAAAGCCCAGTTCTCACAACGTGTCCCAATTCGGTTCATTCTCTGCCTTCCAGACGGCGGCTCCTCTTTAGCGGGCCAACATGTAACGGTTGGTGGCTGGGTCAAGACAGGCCGTGAGCAAGGCAAAGGCTCTTTCGCTTTCCTTGAGCTCAATGATGGGTCGTGTCCTGCTAACCTTCAGGTTATAGTTGATGGGTCAGTTCATGATCTGGGTGCCCTTGTTCCTACTGGCACCTGTGTGCATGTTACTGGTGAACTCAAAACACCCCCTGAAGGGACTAAACAGAAGATTGAGTTGAGAGTTAAGGAGGTTCTTCATGTGGGCCCTGTTGATCCTGCCAAGTACCCCTTGCCTAAGACCAGATTGACTCTTGAGTTCTTGAGGGATTTTGTTCATCTTAGGCCCCGCACTAACACGATTTCTGCAGTTGCTCGAATTCGCAATGCCCTAGCATATGCAACTCATACATTCTTCCAAAAGCATGGGTTCATGTATATACATACACCTATCATCACTACTAGTGACTGTGAGGGTGCAGGTGAAATGTTTCAAGTCACAACGTTGATCAGTGAGGCTGAGAAGGTGGAGAAAGAAATGAAGGAGAATCCACCTCCATCAGAAGTTGACATAGAAGCGGCAAAGCTTGTTGTTCAGGAGAAAGGGGAAGCTGTTAAAAAACTGAAGGCAGACAAGGCGAGCAAACAGGAAATAACTGCTGCTGTTACAGAACTGAACAAATCAAAAGATAATGTTGCAAAGTTGGAAGAGAGAGCTAAGCTTACTCCTGGACTTCCCAAAAAGGACGGAAAAGTAGATTATGCCAAAGATTTTTTTGGCCGTCAAGCATTCTTGACTGTCTCAGGGCAATTGCAAGTAGAATCTTTTGCGTGTTCCCTTAGTAGTGTTTACACATTTGGGCCTACATTTCGTGCTGAGAACTCTCACACTTCAAGGCATCTGGCTGAGTTTTGGATGGTTGAGCCAGAAATAGCATTTGCTGATCTTCAGGATGATATGAATTGCGCAGAGGCATATGTAAAGTTTTTGTGTCAGTGGCTACTGGACAACTGCCTGGATGATATGGAATTTATGGCCAAAAACTTTGACAAGAGTGCTGTTGACCGTTTGAAAATGGTTGCCTCAACTCCTTTTGAGAGGATTACTTACACAGATGCAATTGACTTGCTAGAACAAGTAAAAGATAAAAAATTTGAGAACAAAGTTGAATGGGGGATTGATTTGGCATCTGAGCATGAAAGGTACTTGACTGAGGTCCATTTTAAGAAACCTGTCATAGTATATAACTACCCAAAAGGAATTAAAGCATTTTATATGAGGCTCAATGATGATGGGAAAACTGTGGCTGCCATGGATGTGCTTGTGCCAAAGGTTGGGGAGTTGATTGGGGGAAGCCAGAGAGAAGAGCGTATTGATGTCATCGAGAAAAGGATTTTGGACATGGGATTGCCTTTAGAGCCATACGAATGGTACCTTGACCTCAGGCGCTATGGCACTGTGACGCATAGTGGATTTGGTTTGGGATTTGAGAGGATGATTCTATTTGCGACTGGCATTGATAACATCAGAGATGTTATTCCATTCCCACGTTACCCAGGAAGAGCAGACCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27743.p1 GENE.S_Transcript_27743~~S_Transcript_27743.p1 ORF type:complete len:570 (+),score=134.22,tRNA-synt_2|PF00152.16|3.7e-13,tRNA-synt_2|PF00152.16|3.2e-59,tRNA_anti-codon|PF01336.21|6.1e-12,tRNA_anti-codon|PF01336.21|2.6e+03,WHEP-TRS|PF00458.16|2e-06 S_Transcript_27743:133-1842(+)
MTEQQLSSPPVAEMSAATLNDTTTIQKAQFSQRVPIRFILCLPDGGSSLAGQHVTVGGWVKTGREQGKGSFAFLELNDGSCPANLQVIVDGSVHDLGALVPTGTCVHVTGELKTPPEGTKQKIELRVKEVLHVGPVDPAKYPLPKTRLTLEFLRDFVHLRPRTNTISAVARIRNALAYATHTFFQKHGFMYIHTPIITTSDCEGAGEMFQVTTLISEAEKVEKEMKENPPPSEVDIEAAKLVVQEKGEAVKKLKADKASKQEITAAVTELNKSKDNVAKLEERAKLTPGLPKKDGKVDYAKDFFGRQAFLTVSGQLQVESFACSLSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADLQDDMNCAEAYVKFLCQWLLDNCLDDMEFMAKNFDKSAVDRLKMVASTPFERITYTDAIDLLEQVKDKKFENKVEWGIDLASEHERYLTEVHFKKPVIVYNYPKGIKAFYMRLNDDGKTVAAMDVLVPKVGELIGGSQREERIDVIEKRILDMGLPLEPYEWYLDLRRYGTVTHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL*

Click here to download the sequence:
Link to NCBI Protein BLAST