Transcript Information: S_Transcript_277534.p1


Annotated TAIR IDAT1G74630.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28030521-28032452 | Forward length=643
E-Value3.1E-281
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53805445732091
Replicate 20.48037177885724
Replicate 30.54496420775803
Condition 2: 8 Hour
Replicate 11.8572657196881
Replicate 21.7048531622809
Replicate 31.8232840097573
Condition 3: 24 Hour
Replicate 10.40768056281047
Replicate 20.52870478016362
Replicate 30.35303017052262


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_277534.p1 GENE.S_Transcript_277534~~S_Transcript_277534.p1 ORF type:complete len:643 (+),score=97.16,PPR|PF01535.16|2.4,PPR|PF01535.16|0.0019,PPR|PF01535.16|6.3e-05,PPR|PF01535.16|0.00067,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|77,PPR|PF01535.16|0.0059,PPR|PF01535.16|9.3e-08,PPR|PF01535.16|0.018,PPR|PF01535.16|3.4e+02,PPR|PF01535.16|6e+02,PPR|PF01535.16|2.5e+03,PPR_2|PF13041.2|0.00061,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|9.2e-06,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|6.9e-09,PPR_2|PF13041.2|0.64,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|55,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|1.9e+03,DYW_deaminase|PF14432.2|4.5e-33,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.00082,PPR_1|PF12854.3|0.34,PPR_1|PF12854.3|0.0033,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|4.3 S_Transcript_277534:89-2017(+)
ATGTCAGTGACAGACAAAGTCTCCACTTTTTTCTCACAAAACTGCAGAAACTTGAAACAAATTAAGCAAATCCAAGCCTCAATTTACAAGACAGGCCTAGAAACAGACCCTCTCATTGCCGGAAAACTCATCCTAAACTGTGCCGTTTTGATCCCAAATGCTCTCAAATACGCCTCTCGCCTTCTCTCTCATGTCCAAGTTCCTGATGCATTTATGTTCAATGCCCTTATACGGGGACTATCAGATTCAGATGCCCCTCAAAATTCTATGTTTACATACTCTGAAATGCGCCGGAAATTGGTTGCCCCAGATAGCTTTTCTTTCGTTTTTGCTCTCAAAGCAGCTGCCAATTCGAGGTCTTTAAAAGCTGGGATTCAGCTTCATTGTCAAGCTCTGGTGTTTGGGTTTAATACCCATCTTTTTGTTGGGACTACACTTACTAGCATGTATGGGAAATGTGGGTGTATTGAGTATGCACGTAAGGTGTTTGATGAAATGCCTCAAAGGAATGTGGTTGCTTGGAATGCAATGCTGTCTGCTTGTTTTAGATTTGGGGATCTAAATTGCGCAGAGGAAGTGTTTAATGCAATGCCCAGTTGGGATTTGACCTCTTGGAATGTTATGTTGGCGGGGTATGCAAAGGCGGGGGAGGTGCAACTAACTAAGGAGTTGTTTGCTAAGATGCCTGTTAAGGATGATGTCTCATGGAGTACGATCATTTTGGGGTTTGTGCAAAATGGGGATTTTGAGGACGCTTTTAGGGTGTTTGGGAAGCTGAGGAGCTTGGGATTCACTCCAAATGACGTGAGCTTGACGAGCGTCCTGTCTGCCTGTGCTCAAGCTGGGGCATTTGAATTTGGTAGAATATTGCATGGGTTTGTGGAGAAGGCAGGGTTTGGTTGGACGATCTCTGTGAATAATGCGCTATTGGATACTTATGCGAAAAGTGGGAATTTCAGTATGGCTAAGTTGATCTTTGAAAGAATGCCAGAGAAGACAAGTGTAGTTTCTTGGACATCGATGATTGCAGCCCTAGCTATGCATGGTTTTGGCGAGGAAGCCATTCAGCTTTTTCACAAGATGGAAGGCTCTGGGATAAAGCCTGATTCTGTTGCATTTGTATCAGTTCTTTATTGCTGTAGTCATGCTGGTATGGTTGAGGAAGGATGTGAGTATTTTGATAAGATGACAAATCTTTATGGTATACAGCCATCTATTGAACACGATGGATGCATGGTTGACTTATACGGAAGAGCTGGTCTATTGCAGAAAGACTATGATTTTGTAAAGCAATTGCCTGTACAAAAAAGTGCTACTATCTGGCGGATTCTGCTGGGGGCTTGCAGTATTCATAACGATTTTAAACTGGCACAAGAAGTAGAACTCCGGATTTCCGAAATTGAACCAAGCACTGCAGGAGACCATATGCTGTTGTCGAATATCTATGCCATTGCAGGGGAATGGAAAGCGTCTGCAGCCATGAGAAGATCCATGAGCAGCCTAGGTATCAGGAAGGAACCTGGTTGGAGTATGATCGAGGTTGACAAGATAATGTATACATTTGTAGCTGACAGTGAACTGAATGATGTAACAGAACAGGCATACGAAAAGCTGAGGGAAATAATGTTAAGGCTAAGAGTTGAAGGTGGTTATTTTCCTGAGACCCAGAACGTTTTGTATGATGTTGAAGATGAGGAAAAAGAAGAGACAGTGTCTAGACATAGCGAGAAGCTTGCTGTAGCATTTGGCTTGGTAAGATTGTCTCAGGAAAATGTCATAAGAATAGTGAAGAACTTGAGGATATGTAGGGATTGTCACAAAGTAATGAAATTAATCTCTAAAGTCTATTCGTTAAATATAGTGGTGAGGGACAGAAGCCGATTTCATTCCTTCAAAGATGGATCTTGCACATGTAGAGATTATTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_277534.p1 GENE.S_Transcript_277534~~S_Transcript_277534.p1 ORF type:complete len:643 (+),score=97.16,PPR|PF01535.16|2.4,PPR|PF01535.16|0.0019,PPR|PF01535.16|6.3e-05,PPR|PF01535.16|0.00067,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|77,PPR|PF01535.16|0.0059,PPR|PF01535.16|9.3e-08,PPR|PF01535.16|0.018,PPR|PF01535.16|3.4e+02,PPR|PF01535.16|6e+02,PPR|PF01535.16|2.5e+03,PPR_2|PF13041.2|0.00061,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|9.2e-06,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|6.9e-09,PPR_2|PF13041.2|0.64,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|55,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|1.9e+03,DYW_deaminase|PF14432.2|4.5e-33,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.00082,PPR_1|PF12854.3|0.34,PPR_1|PF12854.3|0.0033,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|4.3 S_Transcript_277534:89-2017(+)
MSVTDKVSTFFSQNCRNLKQIKQIQASIYKTGLETDPLIAGKLILNCAVLIPNALKYASRLLSHVQVPDAFMFNALIRGLSDSDAPQNSMFTYSEMRRKLVAPDSFSFVFALKAAANSRSLKAGIQLHCQALVFGFNTHLFVGTTLTSMYGKCGCIEYARKVFDEMPQRNVVAWNAMLSACFRFGDLNCAEEVFNAMPSWDLTSWNVMLAGYAKAGEVQLTKELFAKMPVKDDVSWSTIILGFVQNGDFEDAFRVFGKLRSLGFTPNDVSLTSVLSACAQAGAFEFGRILHGFVEKAGFGWTISVNNALLDTYAKSGNFSMAKLIFERMPEKTSVVSWTSMIAALAMHGFGEEAIQLFHKMEGSGIKPDSVAFVSVLYCCSHAGMVEEGCEYFDKMTNLYGIQPSIEHDGCMVDLYGRAGLLQKDYDFVKQLPVQKSATIWRILLGACSIHNDFKLAQEVELRISEIEPSTAGDHMLLSNIYAIAGEWKASAAMRRSMSSLGIRKEPGWSMIEVDKIMYTFVADSELNDVTEQAYEKLREIMLRLRVEGGYFPETQNVLYDVEDEEKEETVSRHSEKLAVAFGLVRLSQENVIRIVKNLRICRDCHKVMKLISKVYSLNIVVRDRSRFHSFKDGSCTCRDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST