Transcript Information: S_Transcript_277789.p1


Annotated TAIR IDAT5G11580.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3718913-3721125 | Forward length=553
E-Value2E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7484727817306
Replicate 28.6544644120638
Replicate 38.711900194187
Condition 2: 8 Hour
Replicate 16.6568207343537
Replicate 25.5620618165066
Replicate 35.5939379073846
Condition 3: 24 Hour
Replicate 19.5948521408963
Replicate 29.2032605019974
Replicate 39.963404281579


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_277789.p1 GENE.S_Transcript_277789~~S_Transcript_277789.p1 ORF type:5prime_partial len:362 (-),score=74.98,RCC1|PF00415.14|6.4e-14,RCC1|PF00415.14|5.4e-08,RCC1|PF00415.14|0.00077,RCC1|PF00415.14|0.00092,RCC1_2|PF13540.2|2.2,RCC1_2|PF13540.2|0.22,RCC1_2|PF13540.2|0.00039,RCC1_2|PF13540.2|0.013 S_Transcript_277789:153-1238(-)
GGTGGGGAAACATACAATGCTGGTGATCTTTTATGCTACACCTGGGGTAACAATAAGCACGGCCAACTGGGTTTGGGTGACACAAAGAGCAGATCACAGCCCCATGTTGTTACAATGTTCAGCGAGGAATCTGATTGGGAAGTGTACGAGGTGGCATGTGGTGGACAGCACACTGCTGTGCTCACCCTCAAAAAGAGGTCCAGTGATGCATTAGAGAGTGTTTGCTGGACTTTCGGCCTTGGAGAAAATGGTCAACTTGGACATGCCACCACTCGAGATGTTTTGTGCCCTGAACCTGTTGAACAACTGCCCAAACATGATTATTTTGTTTCTGTAGATTGTGGGCTATTTCACACCAGTGTAGTTTCATCCACTGGGGAAGTGTGGTCATGGGGCATGGAGAGGGGTCTCGGTCTCTGCCCTGATGTTAGTTTTACTGCGACCTACCAAGGAGATGCACTTTTACCATTGTTAATCCTATGTAATGGGCCATGTGGCCCAAAGTTTCCTACGCCTGTCCAAGTTGCATGTGGGGCAGCCCACACTGTCCTTGCTGCGGATGATGGTTATAGGCTATGGTCGTGGGGGCGAGGAAGAAGTGGAGTTCTCGGAACTGGAAATTTGGATGATTCTTACTCTCCCACAATGGTTTTGTGGCCCCCAATGTCGGAGGATCTCAGAGAAGGGTTGCCTTCTACTAGTGAGGAGTACAAGAAGCCCGAGAATACATGTGCAAAAGGTGAGGTGACAGAGGCGGAGAAACAGTTATCCTCTGCAATGGAGGAGATGAAGGTTTTGCAATCAAAACTTGCGACAATGGAACGTTATGCTAGCATTCTTCATGGTGCAATCTATGGCAGGCCGTTTGAGGTACAAGACATTCCAGCCTCATTGCATGAATCTGGTAGTTTCAACATCGCGAAAGAATGGGAGAATATGTTGGAGTCTGCAGATCATGCTAAGCTAATGCGTCTAGAGATGTTTTACAAAAACATGCTGGCAGGAGTCAAGGATAAACTAATGAAGAGGAGGATCCAAGACATCATACTGGAGTGCTTGCAATCTTCTACCACTCGCCCTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_277789.p1 GENE.S_Transcript_277789~~S_Transcript_277789.p1 ORF type:5prime_partial len:362 (-),score=74.98,RCC1|PF00415.14|6.4e-14,RCC1|PF00415.14|5.4e-08,RCC1|PF00415.14|0.00077,RCC1|PF00415.14|0.00092,RCC1_2|PF13540.2|2.2,RCC1_2|PF13540.2|0.22,RCC1_2|PF13540.2|0.00039,RCC1_2|PF13540.2|0.013 S_Transcript_277789:153-1238(-)
GGETYNAGDLLCYTWGNNKHGQLGLGDTKSRSQPHVVTMFSEESDWEVYEVACGGQHTAVLTLKKRSSDALESVCWTFGLGENGQLGHATTRDVLCPEPVEQLPKHDYFVSVDCGLFHTSVVSSTGEVWSWGMERGLGLCPDVSFTATYQGDALLPLLILCNGPCGPKFPTPVQVACGAAHTVLAADDGYRLWSWGRGRSGVLGTGNLDDSYSPTMVLWPPMSEDLREGLPSTSEEYKKPENTCAKGEVTEAEKQLSSAMEEMKVLQSKLATMERYASILHGAIYGRPFEVQDIPASLHESGSFNIAKEWENMLESADHAKLMRLEMFYKNMLAGVKDKLMKRRIQDIILECLQSSTTRPN*

Click here to download the sequence:
Link to NCBI Protein BLAST