Transcript Information: S_Transcript_277960.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.15796585420098
Replicate 20.16571739733131
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_277960.p1 GENE.S_Transcript_277960~~S_Transcript_277960.p1 ORF type:internal len:135 (-),score=18.34,zf-RVT|PF13966.2|1.7e-10,zf-RVT|PF13966.2|4e+03 S_Transcript_277960:3-404(-)
AGGAAGTTTGTGTGGACTCTAGCTTTGGGGAGGATCAACACCAATGACATGCTGCAAAGGCGGAGACCAGGATGGTGCTTGTTCCCTGACGTTTGTGTGATGTGTGGTGCGAGTTGTGAGACGGCATCTCACCTTTTCTTGCAATGTCGTATGGCACAGGCCTTATGGGCTAGGCTTTTTGGGGTGACGGGGGAGGTCATGGTGTTCCTGTCCAGTATACTCAACTTCCTCCAGATTCGGTTTGTTGATTTTGGGGTTGATAGGGATTTGAAGATCTTATGGCGGAATGCTGTGGTAGCTATTTTGTGGTGTATTTGGCTTGAGCGCAATGATAGGGTGTTCTCCCAGGTGACTTTTACCCTAGAGTCGATTAGGGAGTGCATTGCTTTCTTGGCCACGTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_277960.p1 GENE.S_Transcript_277960~~S_Transcript_277960.p1 ORF type:internal len:135 (-),score=18.34,zf-RVT|PF13966.2|1.7e-10,zf-RVT|PF13966.2|4e+03 S_Transcript_277960:3-404(-)
RKFVWTLALGRINTNDMLQRRRPGWCLFPDVCVMCGASCETASHLFLQCRMAQALWARLFGVTGEVMVFLSSILNFLQIRFVDFGVDRDLKILWRNAVVAILWCIWLERNDRVFSQVTFTLESIRECIAFLATL

Click here to download the sequence:
Link to NCBI Protein BLAST