Transcript Information: S_Transcript_277962.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value8E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30945350273466
Replicate 20
Replicate 30.64335125873025
Condition 2: 8 Hour
Replicate 10.12398482742519
Replicate 20
Replicate 30.49571738616236
Condition 3: 24 Hour
Replicate 10.25401027314644
Replicate 20.52706538549645
Replicate 30.586559172212


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_277962.p1 GENE.S_Transcript_277962~~S_Transcript_277962.p1 ORF type:3prime_partial len:172 (-),score=17.84,zf-RVT|PF13966.2|3.1e-09,zf-RVT|PF13966.2|6.7e+03 S_Transcript_277962:3-515(-)
ATGACCCCTCATCCCCTGTTTCATTCCCCCTTAAGTAGGCTTGAGGTGACAAATTTTTTTCAAAAAATACTTTGGGGTCAACACATGGACCATAATTGGAAGACAGAGGTAACTATTGGCGGTAAATTGCAAGCCTTGGGGAGGATCAATACCAATGACATGCTGCAAAGGCGGAGACCAGGATGGTGCTTGTTCCCTGACGTTTGTGTGATGTGTGCTGCGAGTGGTGAGACGGCATCTCACCTTTTCTTGCAATGTCGTATGGCACAGGCCTTATGGGCTAGGCTTTTTGGGGTGACGGGGGAGGTCATGGTGTTCCTGTCCAGTATACTCAACTTCCTCCAGATTCGGTTTGTTGATTTTGGGGTTGATAGGGATTTGAAGATCTTATGGCGGAATGCTGTGGTAGCTATTTTGTGGTGTATTTGGCTTGAGCGCAATGATAGGGTGTTCTCCCAGGTGACTTTTACCCTAGAGTCGATTAGGGAGTGCATTGCTTTCTTGGCCACGTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_277962.p1 GENE.S_Transcript_277962~~S_Transcript_277962.p1 ORF type:3prime_partial len:172 (-),score=17.84,zf-RVT|PF13966.2|3.1e-09,zf-RVT|PF13966.2|6.7e+03 S_Transcript_277962:3-515(-)
MTPHPLFHSPLSRLEVTNFFQKILWGQHMDHNWKTEVTIGGKLQALGRINTNDMLQRRRPGWCLFPDVCVMCAASGETASHLFLQCRMAQALWARLFGVTGEVMVFLSSILNFLQIRFVDFGVDRDLKILWRNAVVAILWCIWLERNDRVFSQVTFTLESIRECIAFLATL

Click here to download the sequence:
Link to NCBI Protein BLAST