Transcript Information: S_Transcript_278253.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72580912459583
Replicate 20.60171244247768
Replicate 30.33532247424728
Condition 2: 8 Hour
Replicate 10.38773436940242
Replicate 21.0169022108967
Replicate 30.38756086554511
Condition 3: 24 Hour
Replicate 10.39717969982898
Replicate 20.20603465069407
Replicate 30.22929131277378


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_278253.p1 GENE.S_Transcript_278253~~S_Transcript_278253.p1 ORF type:internal len:110 (-),score=30.27,DUF1771|PF08590.6|1.1e-09 S_Transcript_278253:2-328(-)
GAATACTACAAAGCTGCTGTTGAGGCATATTCTAAGGGAAATCAAGAGCGAGCTTTCAAACTTATGAAAGAGGGTCAATTTTATAACATGAAGGCTCGAGAAGCTGACGAAAAGTCCGCACAAAAGCTTTTGGAAACAAGTGATGAGGAAATGTTGCTTGATTTGAGTACCCATCAACCAAAGGAAGCAGTTAAAATCCTGAAGCTTCATCTATCTAATCTTGCTGGCATCCCAAGTATACCTTTTCTCAAGGTCACCGTGGGAAATGATGACAATGAGAGCAAACGTGGGGGTCCAAAACGACTGGTTCTAAAGCTTTTGGAGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_278253.p1 GENE.S_Transcript_278253~~S_Transcript_278253.p1 ORF type:internal len:110 (-),score=30.27,DUF1771|PF08590.6|1.1e-09 S_Transcript_278253:2-328(-)
EYYKAAVEAYSKGNQERAFKLMKEGQFYNMKAREADEKSAQKLLETSDEEMLLDLSTHQPKEAVKILKLHLSNLAGIPSIPFLKVTVGNDDNESKRGGPKRLVLKLLER

Click here to download the sequence:
Link to NCBI Protein BLAST