Transcript Information: S_Transcript_278348.p1


Annotated TAIR IDAT1G09820.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3190594-3192414 | Reverse length=606
E-Value7E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9939626389578
Replicate 22.6199562599549
Replicate 31.9595407088826
Condition 2: 8 Hour
Replicate 12.1325390317133
Replicate 21.5380645939812
Replicate 33.4638252358095
Condition 3: 24 Hour
Replicate 13.0036714799567
Replicate 22.9746252693956
Replicate 32.6798422180436


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_278348.p1 GENE.S_Transcript_278348~~S_Transcript_278348.p1 ORF type:complete len:160 (-),score=37.87,PPR_2|PF13041.2|0.0053,PPR_2|PF13041.2|1.5e-12,PPR_2|PF13041.2|2.2e-16,PPR_2|PF13041.2|4.4e-16,PPR_2|PF13041.2|4.1e+02,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|1.4e-11,PPR_1|PF12854.3|5.2e-12,PPR_1|PF12854.3|4.4,PPR|PF01535.16|1e+02,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|1.6e-08,PPR|PF01535.16|1.2e-10,PPR|PF01535.16|1.3e+03,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|7.7e-06,PPR_3|PF13812.2|2.2e+03 S_Transcript_278348:62-490(-)
ATGGGGCATAAACCTGAGACAGTGACATATAACATAAGGGCTGGTGCTCTCTGCCAGAAAGGTGAGACAAGAAATGCAGTTCAGCTATTAAATGAAATGTTGGAGATGGGTTTGACTCTGAATCATGTGACCTACAATACCTTGATTGATGGCTACTGTAGGGAAGGAAATCTTGGGGCTGCTATGACTATGAGAATGAGAATGGAAAGAGAGGGTAGAAGAGCAAATTTGGTGACTTACAATTTGTTAATAAAGGGTCTTTGTAGTAAAGGGAAGTTGGAAGAAGCAAACAAACTTCTCAACGAGATGTTAGAGAAAGGTCTTGTCCCGAATAGGATCACCTATGATATAATAAAGGAAGAAATGATGGAGAAGGGATTTGTTCCAGATATTGATGGGCATCTTTATAGCCAGTCTCCAATGTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_278348.p1 GENE.S_Transcript_278348~~S_Transcript_278348.p1 ORF type:complete len:160 (-),score=37.87,PPR_2|PF13041.2|0.0053,PPR_2|PF13041.2|1.5e-12,PPR_2|PF13041.2|2.2e-16,PPR_2|PF13041.2|4.4e-16,PPR_2|PF13041.2|4.1e+02,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|1.4e-11,PPR_1|PF12854.3|5.2e-12,PPR_1|PF12854.3|4.4,PPR|PF01535.16|1e+02,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|1.6e-08,PPR|PF01535.16|1.2e-10,PPR|PF01535.16|1.3e+03,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|7.7e-06,PPR_3|PF13812.2|2.2e+03 S_Transcript_278348:62-490(-)
MGHKPETVTYNIRAGALCQKGETRNAVQLLNEMLEMGLTLNHVTYNTLIDGYCREGNLGAAMTMRMRMEREGRRANLVTYNLLIKGLCSKGKLEEANKLLNEMLEKGLVPNRITYDIIKEEMMEKGFVPDIDGHLYSQSPMS*

Click here to download the sequence:
Link to NCBI Protein BLAST