Transcript Information: S_Transcript_278446.p1


Annotated TAIR IDAT1G05385.1
Annotated Gene Namephotosystem II 11 kDa protein-related
Annotated Gene Symbol(s)LPA19, Psb27-H1
Annotation TypeHomolog
Chromosome Positionchr1:1582747-1583648 | Reverse length=199
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.54476023598802
Replicate 30.45537619959508
Condition 2: 8 Hour
Replicate 11.0531056946732
Replicate 21.1047826488754
Replicate 30
Condition 3: 24 Hour
Replicate 11.8878294374588
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_278446.p1 GENE.S_Transcript_278446~~S_Transcript_278446.p1 ORF type:5prime_partial len:81 (+),score=7.35,PSII_Pbs27|PF13326.2|7.6e-06 S_Transcript_278446:3-245(+)
AGGCGTACTGCAGATGCTGCAAAAGAGTCTATTCGCGACTATTTGAGTAACTGGAAGGGCCAGCAAGCTGTCTCAAAAGAAGTAAGTGAACTTAGGATGCATTGTTCCATAGAGGCATACATTAGTTTGAATATCACTATGAAACTCTGGACACAAAGCTATTTAAATATCAGTTGTGAGATTCAATCATCTGTTAAGCTACTTGGCATCAATAAATTGATTCACTTTCACCTTATTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_278446.p1 GENE.S_Transcript_278446~~S_Transcript_278446.p1 ORF type:5prime_partial len:81 (+),score=7.35,PSII_Pbs27|PF13326.2|7.6e-06 S_Transcript_278446:3-245(+)
RRTADAAKESIRDYLSNWKGQQAVSKEVSELRMHCSIEAYISLNITMKLWTQSYLNISCEIQSSVKLLGINKLIHFHLIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST