Transcript Information: S_Transcript_278487.p4


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.47599677956865
Replicate 30.22676433622321
Condition 3: 24 Hour
Replicate 10
Replicate 20.24110437847178
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_278487.p4 GENE.S_Transcript_278487~~S_Transcript_278487.p4 ORF type:complete len:94 (-),score=7.07,gag_pre-integrs|PF13976.2|2.2e-07 S_Transcript_278487:84-365(-)
ATGCTGTATAGTCTCTGGCATCATAGATTGGACCATGCTCCCTTTAATAAAATGAGATCTATTCCTTCAATTTCTGATATATTCAAGTCTTGCGATTCCAGTTCTTTGCCTGTGTGTATATCATGTCCTATGGCCAAGATGTCCAAATTACCTTTTCATTTAAGTCAGTCAGAAGCACATTATGCTTTTGAGTTTCTTCATATGGATATTTGGGGTCCTTATAGAGTTCCAACACAACAATTTCAGAGACTCCCTCCGTTTCAAAATGATCCGCTAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_278487.p4 GENE.S_Transcript_278487~~S_Transcript_278487.p4 ORF type:complete len:94 (-),score=7.07,gag_pre-integrs|PF13976.2|2.2e-07 S_Transcript_278487:84-365(-)
MLYSLWHHRLDHAPFNKMRSIPSISDIFKSCDSSSLPVCISCPMAKMSKLPFHLSQSEAHYAFEFLHMDIWGPYRVPTQQFQRLPPFQNDPLG*

Click here to download the sequence:
Link to NCBI Protein BLAST