Transcript Information: S_Transcript_278599.p1


Annotated TAIR IDAT5G39120.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15662705-15663486 | Reverse length=221
E-Value8.7E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4161312093313
Replicate 20.86709653282809
Replicate 30.64428772344456
Condition 2: 8 Hour
Replicate 10.093123975183987
Replicate 20.58616197309327
Replicate 34.3748682857385
Condition 3: 24 Hour
Replicate 10.76314003460591
Replicate 20.2969058285111
Replicate 30.22027986380014


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_278599.p1 GENE.S_Transcript_278599~~S_Transcript_278599.p1 ORF type:complete len:229 (+),score=28.17,Cupin_1|PF00190.18|6.7e-48,Cupin_2|PF07883.7|1.1e-10 S_Transcript_278599:69-755(+)
ATGTCACCTACGAACGTCCTTGCCTTTGTTGGCCTCCTGGCCATGGCTTCATATGTAGCCTTGGCAACGGATCCCACCCAGCTCCAAGATTTCTGTGTTGCCGTCAATAACCCTAAGGATGCATTGTTCGTCAATGGGCTATTTTGCAAGGATCCAATGTTAGCCACACCCGAAGATTTCTTCCGTGGAGGGCTAGACAAGGCAGGAGACACAAAGAACAACAACGTAGGATCCAATGTGACCTTGGTAAGTGCATTACAATTGGCAGGACTCAACACTCTAGGAATATCACTAGCAAGGATTGATTTCGCACCCAACGGTGGCCTAAATCCTCCACACATCCATCCTCGTGCAACCGAGATCATCGTAGTCCTTGAAGGAACACTCCATGTTGGTTTTGTCACCTCCAACCTACCAAATGCCAAGAACAAGCTCTTCGCTAAGGTCCTTAACAAGGGAGATGTTTTCGTGTTCCCTCAAGGATTAATTCACTTCCAATTCAACATTGGCAAAGAACCTGCCGTTGTAATTGCTGGGTTGAGTAGTCAAAACCCTGGTGTCACCACCATTGCTAACGCCGTCTTCGGTGCACAACCACCCATCTCTGTTGATGTTTTGAGCAAGGCCTTCCAACTTGATCCCAAGATTGTTAAATTTCTCCAGTCCCGATTCTGGATCAGCCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_278599.p1 GENE.S_Transcript_278599~~S_Transcript_278599.p1 ORF type:complete len:229 (+),score=28.17,Cupin_1|PF00190.18|6.7e-48,Cupin_2|PF07883.7|1.1e-10 S_Transcript_278599:69-755(+)
MSPTNVLAFVGLLAMASYVALATDPTQLQDFCVAVNNPKDALFVNGLFCKDPMLATPEDFFRGGLDKAGDTKNNNVGSNVTLVSALQLAGLNTLGISLARIDFAPNGGLNPPHIHPRATEIIVVLEGTLHVGFVTSNLPNAKNKLFAKVLNKGDVFVFPQGLIHFQFNIGKEPAVVIAGLSSQNPGVTTIANAVFGAQPPISVDVLSKAFQLDPKIVKFLQSRFWISP*

Click here to download the sequence:
Link to NCBI Protein BLAST