Transcript Information: S_Transcript_278694.p1


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value1.4E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24514210619461
Replicate 30.81967715927114
Condition 2: 8 Hour
Replicate 10.23694878130148
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.25182012862608
Replicate 30.28024493783462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_278694.p1 GENE.S_Transcript_278694~~S_Transcript_278694.p1 ORF type:internal len:90 (+),score=16.95,Transket_pyr|PF02779.20|3.4e-09 S_Transcript_278694:2-268(+)
CAGAGGCGCTTTCCATCTCGGTGCTTTGATGTTGGAATAGCTGAAGGACATGGAGTAACTTTTGCTGCTGGATTAGCTTGTGAAGGTCTCAAACCATTTTGTGCAATATACTCATCTTTCATGCAAAGGGGATATGATCAGGAAAATACCGCTACCACAGTTGAATGCATAGCTAGAGGTGCTTCTCATATAATCAACAGAGCCAGCCCAATCACTGTAGTGCATGATGTAGATTTACAAAAGCTACCAGTGAGGTTTGCTATGGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_278694.p1 GENE.S_Transcript_278694~~S_Transcript_278694.p1 ORF type:internal len:90 (+),score=16.95,Transket_pyr|PF02779.20|3.4e-09 S_Transcript_278694:2-268(+)
QRRFPSRCFDVGIAEGHGVTFAAGLACEGLKPFCAIYSSFMQRGYDQENTATTVECIARGASHIINRASPITVVHDVDLQKLPVRFAMD

Click here to download the sequence:
Link to NCBI Protein BLAST