Transcript Information: S_Transcript_27871.p1


Annotated TAIR IDAT5G23395.1
Annotated Gene NameCox19-like CHCH family protein
Annotated Gene Symbol(s)MIA40
Annotation TypeOrtholog
Chromosome Positionchr5:7874848-7876091 | Reverse length=162
E-Value9.1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.088750514658
Replicate 214.555312555305
Replicate 314.472424843381
Condition 2: 8 Hour
Replicate 116.88260066773
Replicate 213.360965159837
Replicate 315.246752106341
Condition 3: 24 Hour
Replicate 110.315639426114
Replicate 210.072805145043
Replicate 313.837093805584


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27871.p1 GENE.S_Transcript_27871~~S_Transcript_27871.p1 ORF type:complete len:144 (+),score=36.54,CHCH|PF06747.9|6.2e+03,CHCH|PF06747.9|2.9e-06 S_Transcript_27871:257-688(+)
ATGGGTCAAGCCCAAAGCCACGTGGCTGTAGCTATTGATGAAAGCTCTAAGGGGAATGCCCCAGCCTCATCCATGGAATCTCTCATTGCAGAGGCAGCAGCATATGGAAGCGACGAGAATGAGTCCATTGATTCACAAGCAAAGAAGGCATTGGAATGTCCGTGCATAGCTGACTTGCGGAAGGGCCCATGTGGGAGCCAGTTCTCCGAGGCCTTCCTCTGTTTTCTTAAGAGCACATCTGAAGAAAAGGGTTCAGATTGTGTGCATCCATTTGTGGCATTGCAAACTTGTATAAAAGCAAACTCCAATGCCTTTTCAAAGGACATTATGGGAGATGACCAAGGCAAGAATGAGGGGGAGGCGTCCTCGGATTACAGAATAATTCCACCTACTTGGTCTTTGGAATCAAAAGGGCCAAAATCTAGACTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27871.p1 GENE.S_Transcript_27871~~S_Transcript_27871.p1 ORF type:complete len:144 (+),score=36.54,CHCH|PF06747.9|6.2e+03,CHCH|PF06747.9|2.9e-06 S_Transcript_27871:257-688(+)
MGQAQSHVAVAIDESSKGNAPASSMESLIAEAAAYGSDENESIDSQAKKALECPCIADLRKGPCGSQFSEAFLCFLKSTSEEKGSDCVHPFVALQTCIKANSNAFSKDIMGDDQGKNEGEASSDYRIIPPTWSLESKGPKSRL*

Click here to download the sequence:
Link to NCBI Protein BLAST