Transcript Information: S_Transcript_278748.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.44721870724692
Replicate 30.2492261632919
Condition 2: 8 Hour
Replicate 10.72045237557882
Replicate 20
Replicate 30.14402599733096
Condition 3: 24 Hour
Replicate 10.59040225650254
Replicate 20.45940158600704
Replicate 30.68167687581395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_278748.p1 GENE.S_Transcript_278748~~S_Transcript_278748.p1 ORF type:internal len:148 (+),score=17.68,rve|PF00665.22|2.7e-14 S_Transcript_278748:2-442(+)
GGTCATTTACATGAAAAAGGGTTGAAATTACTAAGCCAGAAAAATATGGTTTTGGGACTGCCTAGAATAAGCGCACTTGCTTTTTGTGAAGGTTGTATTTATGGTAAACAGAGAAGGAAGTCTTTTCCTGTAAACAAATCATGGAGAGCTACTGCTTGTCTCCAATTGGTTCATGTTGATGTTTGTGGTCCAATGAGTGTTGAGTCTTTTGGCGGAAGCATATATTTCTTGATGTTTACCGATGATTATAGTCAGATGAGTTGGGTGTATTTTTCGGAGAAAAAATCTGACTGTTTTGTTTGCATCAAGAAATTCAAGGCGCTTGTTGAAAATGAGAGTTGCAATCATATAAAGGCGATTCGATCCGACAGAGGTGGTGAATTTACCTCTAATGCTTTTAATATTTTTTGTGATGAGCATGGCATTCACAGGGAATTCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_278748.p1 GENE.S_Transcript_278748~~S_Transcript_278748.p1 ORF type:internal len:148 (+),score=17.68,rve|PF00665.22|2.7e-14 S_Transcript_278748:2-442(+)
GHLHEKGLKLLSQKNMVLGLPRISALAFCEGCIYGKQRRKSFPVNKSWRATACLQLVHVDVCGPMSVESFGGSIYFLMFTDDYSQMSWVYFSEKKSDCFVCIKKFKALVENESCNHIKAIRSDRGGEFTSNAFNIFCDEHGIHREFT

Click here to download the sequence:
Link to NCBI Protein BLAST