Transcript Information: S_Transcript_27892.p1


Annotated TAIR IDAT1G50020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18520144-18521600 | Reverse length=209
E-Value2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.666952196595
Replicate 228.331997519213
Replicate 330.838673451267
Condition 2: 8 Hour
Replicate 19.3225750020253
Replicate 210.635796894296
Replicate 37.6876827427802
Condition 3: 24 Hour
Replicate 139.631154747963
Replicate 232.695334733091
Replicate 327.978551990375


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27892.p1 GENE.S_Transcript_27892~~S_Transcript_27892.p1 ORF type:5prime_partial len:183 (-),score=31.87 S_Transcript_27892:375-923(-)
ACGAGGTTGAGGGAATCGAATTGCTTTTTGGTAACGGAATTGGATTGTGAAGGGTATCATGGGAAAGGTAAAGGGATTCTGAGGTTGCCCAAACTGAGGAGAAGGAATGGGAATGGGTATGGGCATGGAATTAGGAAGTTGCATAGGGTTTGTTGTAAATTTCAGGACGGAGATTCTCAAAGTAAAAATAATGGTGAGCCCCCGGAGTCGTTGTTTATGAAAGAACTGAGAAGACGAGGTATTACACCCACATCATTGCTTGAGGAGAGCAATAGGACCGAAATAGATGAAGAGATAACAGAGCAGATGGATGATAGACCATTTTCAAGCAGAAACACTTTCACAGCTGGTCCTGACAAAAGTCTCTCTAATCAGAGGGAGCAATCAATGGCATTGAACAGCGAAGGCCTTGAGGGACTGATTCCACGAGCTAAACTATTGCTGACACTGGGGGGTACATTCTTCTTGGCATTTTGGCCACTAATCCTCATAACTATTGCCGCTTTTTCTGCTCTGTACCTGCTTGTTCCTGACTTGCAGAATCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27892.p1 GENE.S_Transcript_27892~~S_Transcript_27892.p1 ORF type:5prime_partial len:183 (-),score=31.87 S_Transcript_27892:375-923(-)
TRLRESNCFLVTELDCEGYHGKGKGILRLPKLRRRNGNGYGHGIRKLHRVCCKFQDGDSQSKNNGEPPESLFMKELRRRGITPTSLLEESNRTEIDEEITEQMDDRPFSSRNTFTAGPDKSLSNQREQSMALNSEGLEGLIPRAKLLLTLGGTFFLAFWPLILITIAAFSALYLLVPDLQNL*

Click here to download the sequence:
Link to NCBI Protein BLAST