Transcript Information: S_Transcript_27895.p1


Annotated TAIR IDAT1G50020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18520144-18521600 | Reverse length=209
E-Value7.7E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 165.93311116824
Replicate 275.132742817483
Replicate 372.690964293471
Condition 2: 8 Hour
Replicate 118.059339547842
Replicate 217.131595805196
Replicate 313.922513075326
Condition 3: 24 Hour
Replicate 180.196306508262
Replicate 283.202731687942
Replicate 382.142063535581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27895.p1 GENE.S_Transcript_27895~~S_Transcript_27895.p1 ORF type:complete len:222 (+),score=35.94 S_Transcript_27895:624-1289(+)
ATGGCTTCGCTACAGATGATGAACACTGGGTTTGCGAGGACGAGGTTGAGGGAATCGAATTGCTTTTTGGTAACGGAATTGGATTGTGAAGGGTATCATGGGAAAGGTAAAGGGATTCTGAGGTTGCCCAAACTGAGGAGAAGGAATGGGAATGGGTATGGGCATGGACTTGGGAAGCTGCATAGGGTTTGTTGTAAATTTCAGGACGGAGATTCTCAAAGTAAAAATAATGGTGAGCCTCCAGAGTCATTGTTTATGAAAGAACTGCGGAGACGAGGTATTACACCCACATCATTGCTTGAGGAGAGCAATAGGACCGAAATAGATGAAGAGATAACAGAGCAGATGGATGATAGACCATTTTCAAGCAGAAACACTTTCACAGCTGGTCCTGACAAAAGTCTCACTAATCAGAGGGAGCAATCAATGGCATTGAACAGCGAAGGCCTTGAGGGACTGATTCCACGAGCTAAACTATTGCTGACACTGGGGGGTACATTCTTCTTGGCATTTTGGCCACTAATCCTCATAACTATTGCCGCTTTTTCTGCTCTGTACCTGTACTTTGGGCCAACCTTTGTCCATGATGGAAGCAACACCCCGGTCGCACCACCTCAATATATCGATCCATATGTATTTCTGCAAGAAGAGAGAATTTCTAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27895.p1 GENE.S_Transcript_27895~~S_Transcript_27895.p1 ORF type:complete len:222 (+),score=35.94 S_Transcript_27895:624-1289(+)
MASLQMMNTGFARTRLRESNCFLVTELDCEGYHGKGKGILRLPKLRRRNGNGYGHGLGKLHRVCCKFQDGDSQSKNNGEPPESLFMKELRRRGITPTSLLEESNRTEIDEEITEQMDDRPFSSRNTFTAGPDKSLTNQREQSMALNSEGLEGLIPRAKLLLTLGGTFFLAFWPLILITIAAFSALYLYFGPTFVHDGSNTPVAPPQYIDPYVFLQEERISK*

Click here to download the sequence:
Link to NCBI Protein BLAST