Transcript Information: S_Transcript_27901.p1


Annotated TAIR IDAT1G50020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18520144-18521600 | Reverse length=209
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3486914247176
Replicate 24.2178862389367
Replicate 34.2490617447511
Condition 2: 8 Hour
Replicate 10.94082604340293
Replicate 20.87732739763634
Replicate 31.3583628375723
Condition 3: 24 Hour
Replicate 15.6753863970661
Replicate 24.5549817383835
Replicate 35.1927738481121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27901.p1 GENE.S_Transcript_27901~~S_Transcript_27901.p1 ORF type:internal len:204 (+),score=19.34 S_Transcript_27901:2-610(+)
CCGGAGTCGTTGTTTATGAAAGAACTGAGAAGACGAGGTATTACACCCACATCATTGCTTGAGGAGAGCAATAGGACCGAAATAGATGAAGAGATAACAGAGCAGATGGATGATAGACCATTTTCAAGCAGAAACACTTTCACAGCTGGTCCTGACAAAAGTCTCACTAATCAGAGGGAGCAATCAATGGCATTGAACAGCGAAGGCCTTGAGGGACTGATTCCACGAGCTAAACTATTGCTGACACTGGGGGGTACATTCTTCTTGGCATTTTGGCCACTAATCCTCATAACTATTGCCGCTTTTTCTGCTCTGTACCTGGTAAGACTCTGCACCGTTCACTTTCTGTGCCATTTCATTTTGTATGTCATTAAAATTGAGATGATGACAGTTACATATCACCAAAAAGCTCTCAGCCCACCATCAGGTACTTCAGCTGAAATATTCACCGGCTGCACGGCTTCAGCATGTCAACATTGTACAATGTCTATTTTGTGGGAATTCTCTCCCCCCCCCCCCAAAAAAAAAAAAGAAAAAAAAACAACGCTGCACTCCTTCCTTAGTCCTGTTTTAACTGCAACAGATGCAATTGGTGTTGATACTCATACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27901.p1 GENE.S_Transcript_27901~~S_Transcript_27901.p1 ORF type:internal len:204 (+),score=19.34 S_Transcript_27901:2-610(+)
PESLFMKELRRRGITPTSLLEESNRTEIDEEITEQMDDRPFSSRNTFTAGPDKSLTNQREQSMALNSEGLEGLIPRAKLLLTLGGTFFLAFWPLILITIAAFSALYLVRLCTVHFLCHFILYVIKIEMMTVTYHQKALSPPSGTSAEIFTGCTASACQHCTMSILWEFSPPPPKKKKEKKTTLHSFLSPVLTATDAIGVDTHT

Click here to download the sequence:
Link to NCBI Protein BLAST