Transcript Information: S_Transcript_27905.p2


Annotated TAIR IDAT5G51140.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20784103-20786793 | Reverse length=410
E-Value1.1E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5642412368545
Replicate 21.9698919247781
Replicate 32.1406747239893
Condition 2: 8 Hour
Replicate 13.6177001430851
Replicate 23.9949729713798
Replicate 34.9483217654421
Condition 3: 24 Hour
Replicate 13.7058284492972
Replicate 23.8447537495589
Replicate 33.1527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27905.p2 GENE.S_Transcript_27905~~S_Transcript_27905.p2 ORF type:5prime_partial len:112 (+),score=18.00,PseudoU_synth_2|PF00849.18|3e-17 S_Transcript_27905:3-338(+)
GAACCACCGGTAATGGCCTGGGATGTCTCGATTCTGCAGAAAGAACCTGAAGTGCTGACTGTCTGCAAGCCGGCTTCTGTTCCTGTGCATCCTTGCGGTCAATACCGGAAGAACACGATCCTGGGAATTCTCGAAGCAGAGCATGGTTTAACACCACTATTCCCTATACATAGATTGGATCGTCTGGTCTCTGGACTCCTGATATTGGCGAGGAATGCTTGCAAGGCTGATAAGTTCAGGCAACAGATTGAAGCAGGACTGGTGAAGAAACAGTACATTGCAAAGGTTGTTGGGGTTTTTCCTGAGGCAAGTTGTGGACTTGAACATAAATTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27905.p2 GENE.S_Transcript_27905~~S_Transcript_27905.p2 ORF type:5prime_partial len:112 (+),score=18.00,PseudoU_synth_2|PF00849.18|3e-17 S_Transcript_27905:3-338(+)
EPPVMAWDVSILQKEPEVLTVCKPASVPVHPCGQYRKNTILGILEAEHGLTPLFPIHRLDRLVSGLLILARNACKADKFRQQIEAGLVKKQYIAKVVGVFPEASCGLEHKL*

Click here to download the sequence:
Link to NCBI Protein BLAST