Transcript Information: S_Transcript_27916.p1


Annotated TAIR IDAT1G13830.1
Annotated Gene NameCarbohydrate-binding X8 domain superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4739999-4740926 | Reverse length=197
E-Value9.2E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.91023007451177
Replicate 20
Replicate 31.9496202077727
Condition 3: 24 Hour
Replicate 10
Replicate 20.55277589210603
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27916.p1 GENE.S_Transcript_27916~~S_Transcript_27916.p1 ORF type:complete len:164 (+),score=19.94,X8|PF07983.9|8.7e-20 S_Transcript_27916:288-779(+)
ATGGCTGTTTTAGTGTTCTTGGCTCTTTTCTTGGCCCTGACTGGCCATTCAGGTGCAACATATTGTATATGTAAAGATGGAATAGGAGATACAGCTTTGCAAAAGACAATAGACTATGCTTGTGGAGCAGGAGCTGATTGTAGAGCAATCCTTCAAAATGGAGCTTGTTTCCAACCTAACACTGTCAAAGCTCACTGTGATTATGCTGCCAACAGTTATTTCCAGAACAAGGGCCAAAGTCCTATGGCCTGTGATTTCTCTGGCACTGCCACCCCTTCCAATTCTCCCCCTAGCACTGTGGTTTCTGGCTGCTCCTATCCTACAAGTCCTGGGTATAGTCTTCTATCCATGTCTCTATTTTCTCAGCTTTTTATGGATCTTTACATGATACGTTATCTTTTCTATATCTGCCTTAGTACGAAAAATTTACATGTATATATGGATTTGCACATATATGTTCTGTTAGGTGTGAAAATGTACATGTTATGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27916.p1 GENE.S_Transcript_27916~~S_Transcript_27916.p1 ORF type:complete len:164 (+),score=19.94,X8|PF07983.9|8.7e-20 S_Transcript_27916:288-779(+)
MAVLVFLALFLALTGHSGATYCICKDGIGDTALQKTIDYACGAGADCRAILQNGACFQPNTVKAHCDYAANSYFQNKGQSPMACDFSGTATPSNSPPSTVVSGCSYPTSPGYSLLSMSLFSQLFMDLYMIRYLFYICLSTKNLHVYMDLHIYVLLGVKMYMLC*

Click here to download the sequence:
Link to NCBI Protein BLAST