Transcript Information: S_Transcript_27918.p1


Annotated TAIR IDAT1G13830.1
Annotated Gene NameCarbohydrate-binding X8 domain superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4739999-4740926 | Reverse length=197
E-Value9.2E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48682319332647
Replicate 22.2869964785229
Replicate 30.44982283130733
Condition 2: 8 Hour
Replicate 10.39009860336219
Replicate 20.95489597852492
Replicate 31.9496202077727
Condition 3: 24 Hour
Replicate 11.5984061090679
Replicate 20.55277589210603
Replicate 32.306894305346


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27918.p1 GENE.S_Transcript_27918~~S_Transcript_27918.p1 ORF type:complete len:164 (+),score=22.09,X8|PF07983.9|8.7e-20 S_Transcript_27918:288-779(+)
ATGGCTGTTTTAGTGTTCTTGGCTCTTTTCTTGGCCCTGACTGGCCATTCAGGTGCAACATATTGTATATGTAAAGATGGAATAGGAGATACAGCTTTGCAAAAGACAATAGACTATGCTTGTGGAGCAGGAGCTGATTGTAGAGCAATCCTTCAAAATGGAGCTTGTTTCCAACCTAACACTGTCAAAGCTCACTGTGATTATGCTGCCAACAGTTATTTCCAGAACAAGGGCCAAAGTCCTATGGCCTGTGATTTCTCTGGCACTGCCACCCCTTCCAATTCTCCCCCTAGCACTGTGGTTTCTGGCTGCTCCTATCCTACAAGTCCTGGGTATAGTCTTCTATCCATGTCTCTATTTTCTCAGCTTTTTATGGATCTTTACATGATTTGTTATCTTTTCATTATCTTCTTTGGTACTACAAATTTACATGTATATGTGGATTTGCGCATATATGTTTTGTTAGGTGTGAAAATGTACACGTTATGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27918.p1 GENE.S_Transcript_27918~~S_Transcript_27918.p1 ORF type:complete len:164 (+),score=22.09,X8|PF07983.9|8.7e-20 S_Transcript_27918:288-779(+)
MAVLVFLALFLALTGHSGATYCICKDGIGDTALQKTIDYACGAGADCRAILQNGACFQPNTVKAHCDYAANSYFQNKGQSPMACDFSGTATPSNSPPSTVVSGCSYPTSPGYSLLSMSLFSQLFMDLYMICYLFIIFFGTTNLHVYVDLRIYVLLGVKMYTLC*

Click here to download the sequence:
Link to NCBI Protein BLAST