Transcript Information: S_Transcript_27930.p2


Annotated TAIR IDAT5G13760.1
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4442102-4444565 | Forward length=569
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.59953232493247
Replicate 30.40092904529566
Condition 2: 8 Hour
Replicate 10.2317977208384
Replicate 21.094275205204
Replicate 30.46338799141264
Condition 3: 24 Hour
Replicate 10.23744438576733
Replicate 20
Replicate 30.5483053131547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27930.p2 GENE.S_Transcript_27930~~S_Transcript_27930.p2 ORF type:complete len:184 (+),score=59.61 S_Transcript_27930:1191-1742(+)
ATGGGCGCTTCTCAACCTCCTGTGGAGGAGAGAGAAAATGGAGAGAAGGTGGTGGAAGCAGGGATGAACCATGCATCTATGCTGAGAAATTTGAATCCCACAAACCCATTAAGGATTGTGATTAATGGTGGTGCTAATCCAAATGCTCATGTTAATCATCCTGCTAATTACTATGGCGGCTCCAGAGATAGACAAAGAGCATTTCCTAATCCTATACCAGCAGCTACAGCAACTGTAACAATGGCGACTCCTCCACCTCCTGTTCATCCACCTCATCATCATCATCATCAACATCCTCCTCCTCCACCTCCTGTTCATCCACCTCATCATCATCATCGTCATGATCGTCATCAACATCCTCCTCCTCCTCCTGTTGCTCAGCCTCAGCCTCAGCCTCCGCCTCAATTCACTCCTACCCCTATCCAAGTCCAGCCGCCATCATTGGCTACATTGAATTCAAGAGGGTACACAAACAAAATCTCTGTTTGTGTTTGTGCTACACATGATAGCAGCAATTGGGTTGGTTGGTTTTCTAGTATACAAAGGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27930.p2 GENE.S_Transcript_27930~~S_Transcript_27930.p2 ORF type:complete len:184 (+),score=59.61 S_Transcript_27930:1191-1742(+)
MGASQPPVEERENGEKVVEAGMNHASMLRNLNPTNPLRIVINGGANPNAHVNHPANYYGGSRDRQRAFPNPIPAATATVTMATPPPPVHPPHHHHHQHPPPPPPVHPPHHHHRHDRHQHPPPPPVAQPQPQPPPQFTPTPIQVQPPSLATLNSRGYTNKISVCVCATHDSSNWVGWFSSIQRN*

Click here to download the sequence:
Link to NCBI Protein BLAST