Transcript Information: S_Transcript_27932.p1


Annotated TAIR IDAT5G13760.1
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4442102-4444565 | Forward length=569
E-Value1.2E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.561693215603
Replicate 221.874218706596
Replicate 321.406184274812
Condition 2: 8 Hour
Replicate 115.055361027309
Replicate 216.138325001649
Replicate 313.336068757988
Condition 3: 24 Hour
Replicate 119.641724300944
Replicate 217.007544071823
Replicate 316.814696270077


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27932.p1 GENE.S_Transcript_27932~~S_Transcript_27932.p1 ORF type:complete len:585 (+),score=115.60,Choline_transpo|PF04515.8|8.2e+02,Choline_transpo|PF04515.8|3.9e-47 S_Transcript_27932:1191-2945(+)
ATGGGCGCTTCTCAACCTCCTGTGGAGGAGAGAGAAAATGGAGAGAAGGTGGTGGAAGCAGGGATGAACCATGCATCTATGCTGAGAAATTTGAATCCCACAAACCCATTAAGGATTGTGATTAATGGTGGTGCTAATCCAAATGCTCATGTTAATCATCCTGCTAATTACTATGGCGGCTCCAGAGATAGACAAAGAGCATTTCCTAATCCTATACCAGCAGCTACAGCAACTGTAACAATGGCGACTCCTCCACCTCCTGTTCATCCACCTCATCATCATCATCATCAACATCCTCCTCCTCCACCTCCTGTTCATCCACCTCATCATCATCATCGTCATGATCGTCATCAACATCCTCCTCCTCCTCCTGTTGCTCAGCCTCAGCCTCAGCCTCCGCCTCAATTCACTCCTACCCCTATCCAAGTCCAGCCGCCATCATTGGCTACATTGAATTCAAGAGGGTACACAAACAAAATATCTCTGTTTGTGTTTGTGCTACACATGATAGCAGCAATTGGGTTGGTTGGTTTTCTAGTATACAAAGGAATTGAAGGGTTTGTTGGGGGAGGGAGGTTTAAGAGAAAGGAGCAAGATATGTTGAAGCATTATGTGCCCCAAGTTGAGGCTGCTTCTTTATTGAGTATCATTTTGGCCTTTTTATGGCAGAAAGCTGTTAGGATTTGGCCTACATTTATGGTTCATTTCATATTATGGAGCAGTTTTGTAATGTCCTTAGCAGCTGGGATTCTCCTAATTTGCTTCCAAAGGCCTACCACTGATGGTTGTGGAGTGGCCTTAATCGCTTTCGCTATTGGGAATGGTTTATACTCTTGTTGGGTCACACAAAGAACTAAGTTTTGTACCAAGGTTTTGATGAAATCTCTAGAACCAGTTGCTAAGTTCCCTGATTTGAATCATCCTTCTTACTATATGCTTGGGGCCGGATTCTTGTGGATGTCATTGTGGATTATGGCTGTCATTGGAGCTTTGAATTTCTATTTTCCGCCTTTGGTTATAATCGCGCTTGTGTTGAGCTTGGCTTGGACTACTGAGGTTATGAGGAATGTGGCTAATTTAACTGTGAGCAGAGTCATTGCTCTGTATTATCTCAGGGGAATGCAATCCAGCACTAAATTCTGCTTCCAAAGGGCCCTTACTCGGAACCTTGGTAGCGCTTGCCTTGGTTCACTCTTTGTTCCTGCCATCGAAGCCTTGAGGATTCTTGCTCGAGGTTTGAATTTGCTCGAGGGAGAAGACGAGTTCATGTTCTCTTGTGCTCATTGTTGCTTGCGGGTTATGGAATCTATCTTCAGATATGGCAATGGATGGGCCTATGTTCAGATTGCTGCATATGGGAAAAATTTTGTGAAGGCATCTCAGGACACTTGGGAACTCTTTCAGAAGCAAGAAATGGAGATAATCGTCGACTCAGACATAACCAGTGCCGTGTGCTTCCTCTCCGGGGTATGCAGTGGCTCGATTTGTGTGATTTTGGTGGCGGCGTGGACTCATACCGTCCACCCAGGCTTCACTGCCACCACCTCTATGATTGCCTTCTTTGTTGGTTACCTCATGACCAGGATTGCAATGGCATTGCCTCATGCTTGTGTGAGCTGTTATTACGTCTGCTATGCGGAGAATCCACAGAACAGGCTGTTTGATTCTACGATTCCTGATCGATTGAACCTGATGAAATCTGGTCGCGATGTTGTTGTTCCTACTCCTAGAGTTCCTCGTCGATTCACAGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27932.p1 GENE.S_Transcript_27932~~S_Transcript_27932.p1 ORF type:complete len:585 (+),score=115.60,Choline_transpo|PF04515.8|8.2e+02,Choline_transpo|PF04515.8|3.9e-47 S_Transcript_27932:1191-2945(+)
MGASQPPVEERENGEKVVEAGMNHASMLRNLNPTNPLRIVINGGANPNAHVNHPANYYGGSRDRQRAFPNPIPAATATVTMATPPPPVHPPHHHHHQHPPPPPPVHPPHHHHRHDRHQHPPPPPVAQPQPQPPPQFTPTPIQVQPPSLATLNSRGYTNKISLFVFVLHMIAAIGLVGFLVYKGIEGFVGGGRFKRKEQDMLKHYVPQVEAASLLSIILAFLWQKAVRIWPTFMVHFILWSSFVMSLAAGILLICFQRPTTDGCGVALIAFAIGNGLYSCWVTQRTKFCTKVLMKSLEPVAKFPDLNHPSYYMLGAGFLWMSLWIMAVIGALNFYFPPLVIIALVLSLAWTTEVMRNVANLTVSRVIALYYLRGMQSSTKFCFQRALTRNLGSACLGSLFVPAIEALRILARGLNLLEGEDEFMFSCAHCCLRVMESIFRYGNGWAYVQIAAYGKNFVKASQDTWELFQKQEMEIIVDSDITSAVCFLSGVCSGSICVILVAAWTHTVHPGFTATTSMIAFFVGYLMTRIAMALPHACVSCYYVCYAENPQNRLFDSTIPDRLNLMKSGRDVVVPTPRVPRRFTG*

Click here to download the sequence:
Link to NCBI Protein BLAST