Transcript Information: S_Transcript_279335.p1


Annotated TAIR IDAT2G43945.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59870.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18197995-18199988 | Reverse length=289
E-Value1.8E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27721876286646
Replicate 20
Replicate 30.57633550261252
Condition 2: 8 Hour
Replicate 10
Replicate 20.23304008999715
Replicate 30.22204007921856
Condition 3: 24 Hour
Replicate 10.45510173938738
Replicate 20.23608137058695
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_279335.p1 GENE.S_Transcript_279335~~S_Transcript_279335.p1 ORF type:5prime_partial len:96 (-),score=5.36 S_Transcript_279335:172-459(-)
GAGAAGCCTCATAATGATCATCTACCTTTGATAGAAGCAAGCAGGTTATGCAACATGGATATCATTTCGCAAGTACAGCAGGTGATTTGTTTTGCATTTCACGACAGTAAACTACTCATGGAAACATGTCAAGAAGCAAAAAAACCTCCGGAAGATTGTAACACTTTTCTATCTAGACTGATGAAAAAGAAAGCATGTTTTTGTCTGTTTATACACTATTTTGGAGGTAGGACGAGATCTGCTGAATGCAAAAGCTCGGTCATTGGTCTCTATTTTTCTGAAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_279335.p1 GENE.S_Transcript_279335~~S_Transcript_279335.p1 ORF type:5prime_partial len:96 (-),score=5.36 S_Transcript_279335:172-459(-)
EKPHNDHLPLIEASRLCNMDIISQVQQVICFAFHDSKLLMETCQEAKKPPEDCNTFLSRLMKKKACFCLFIHYFGGRTRSAECKSSVIGLYFSEV*

Click here to download the sequence:
Link to NCBI Protein BLAST