Transcript Information: S_Transcript_27940.p1


Annotated TAIR IDAT3G43300.1
Annotated Gene NameHOPM interactor 7
Annotated Gene Symbol(s)ATMIN7, BEN1
Annotation TypeOrtholog
Chromosome Positionchr3:15234235-15245034 | Reverse length=1758
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.470585411335
Replicate 218.412558758466
Replicate 318.84750069095
Condition 2: 8 Hour
Replicate 122.837488898989
Replicate 222.208182892784
Replicate 323.870870418634
Condition 3: 24 Hour
Replicate 115.587682760874
Replicate 215.993483239583
Replicate 316.563942499027


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27940.p1 GENE.S_Transcript_27940~~S_Transcript_27940.p1 ORF type:complete len:1777 (+),score=393.23,Sec7|PF01369.16|8.2e-63,Sec7_N|PF12783.3|1.4e+04,Sec7_N|PF12783.3|1.5e-38,Sec7_N|PF12783.3|9.1e+02,Sec7_N|PF12783.3|1.7e+02,DUF1981|PF09324.6|28,DUF1981|PF09324.6|6.8e+03,DUF1981|PF09324.6|6.9e+03,DUF1981|PF09324.6|2.4e+03,DUF1981|PF09324.6|99,DUF1981|PF09324.6|6.2e-28,DUF1981|PF09324.6|38,DUF1981|PF09324.6|1.2e+04,DCB|PF16213.1|3e-27,DCB|PF16213.1|94,DCB|PF16213.1|2e+02,DCB|PF16213.1|2e+02,Mon2_C|PF16206.1|7.4e+02,Mon2_C|PF16206.1|9.3e-07 S_Transcript_27940:409-5739(+)
ATGGCGGGTGCAGCTGGGGGTTTCATCACTCGGGCATTTGATGTCATGCTCAAAGAGTGCTCTAACAAGAAGTACCCCTCTCTTCAATCCGCCATTCAATCTTATCTAGATAGCACTAAAGAGGAGAATCAGAAAACCCATGTGGAGGAGAAGGTTACACAACCTGCTACTTCGACTGAAGCTGCCCAGGAAAGTGAGATCAAATCTGATGAGGGCGGTGACAAAGAAGCTGCAGAATCTAATGAGTCTCATGGTACATCTGGTGGGCCTGAACCTGCTGGGAAACCAGTGCAGGTCAAGGTCTCTATTGCTGTTGCACTGTCAAATGCTGGACATACCTTAGAAGGACCTGAAGCAGAGCTTGTTTTAAACCCACTTCGGCTTGCATTTGAGACAAAGAATGTAAAAGTTGTTGAACTGGCATTAGATTGTCTTCATAAACTCATTGCGTATGACCATTTGGAGGGCGATCCTGGTTTGGATGGTGGAAAAAATGCACCTCTATTTGCTGATATTCTAAGCATGATCTGCAGTTGTGTTGATAATTCTTCATTGGACAGTACAATTTTGCAAGTATTGAAAGTGCTTCTGACAGCAGTAGCTTCAACAAAATTTAGAGTGCATGGAGAACCTTTGCTGGGAGTTATAAGAGTATGTTATAACATAGCTCTAAACAGCAAGAGCCCAGTAAATCAAGCTACATCAAAAGCAATGTTGACGCAAATGATCAGCATCACATTCCGGAGGATGGAGTCTGATCCGATTATAACTCATGCGGCGAAGGAGTTCCAAGATCAAAGTTCATCTGGTTCTGGCACACATACAGAAGATACATCTACTAGTAATTCCACGACAGGGGTTGAACCTTCCTCATTGGATGGCAAAAATGAGCAAGGGATGACCCTAGGAGATGCACTTTCTCAAAACCCTAACAAGGATGAATCTCTTGTATCCGTAGAGGAACTCCAGAATCTTGCTGGGGGTGCTGATATAAAGGGTCTCGAGGCCATGCTGGACAAAGCAGTTCATCTTGAAGACGGGAATAAGATGAAACATGGAATGGATCTTGAGAGCATGAGTATCGGGCATCGTGATGCTCTGCTCCTATTTCGCACCCTTTGTAAGATGGGTATGAAGGAAGATAATGATGAAATTGCGACAAAGACACGTATCTTGTCTCTAGAGCTTTTGCAGGGTTTACTGGAAGGCGTGAGCCATGCATTTACAAAGAACTTCCATTTTATTGACTCAGTGAAAGCATATCTTTCATATACTTTGTTGCGGGCATCTGTTTCTTCATCACCCGTAATATTTCAGTATGCAGCAGGTATATTTGCAGTACTGCTATTACGATTTAGAGAGAGCCTGAAGGGTGAGATTGGGATCTTCTTTCCCTTGATCGTGTTAAGGTACTTGGACAATGCAGAATGCCCTCCTACTCAAAGACTAAGTGTACTGAGGATGCTTGAGAAGGTGTGCAGGGATGCACAGATGCTTGTTGACATATATGTTAATTATGATTGTGACCTTGATGCACCAAATCTTTTTGAACGCATGGTTACAACATTGTCAAAAATAGCTCAGGGGACTCAAGTTTCAGACCCAAATTCTGTTGCTGCTTCCCAAAATGCGTCAGTCAAGGGGTCATCACTTCAGTGCCTTGTGAATGTGCTGAAATCATTAGTTGATTGGGAGAAGTCACGTAAAGAACTGGAAAAGCAGAGTAAAGGCGGGAATTCTCTTGATGAAGATCTTTCAGCTAAAGATTCAGTAGACCCAGAAGGCAGGGAGGATGTTTCTAGCAATTTTGAGAAGGCAAAGGCACACAAGTCCACTTTAGAAGCTGCAGTAGCACAGTTCAATAGGCAGCCCAGCAAGGGCATTGAGTACCTGATATCTAATAAGCTGGTGGAAAATACACCAGCTTCTGTTGCTGAATTTTTGAAGAATACCTCCAATTTGGACAAGGTTATGATCGGCGATTTCTTGGGTCAATATGAAGATTTTCCATTGTCTGTCATGCATGCTTATGTTGAATCCATGAATTTTTCTGGAATGATGTTTGGTGCTGCTATACGTGAATTTCTTAGTGGATTTAGACTTCCAGGGGAAGCGCAAAAAATTGACCGTATTATGGAAAAATTTGCTGAGCGTTATTGTGCAGATAACCCAGGTCTCTTCAAGAATGCGGACACAGCTTATGTACTTGCCTATGCAGTCATTATGCTGAATACAGATGCTCATAACCCTATGGTGTCTTCTAAAATGTCAAAGGCTGATTTTGTATGTATGAATACTATGGCTGATGCAGAGGAGACCCCACCTAAGGAACTCTTAGAAGAGCTCTATGATTCTATTGTGAAAGAAGAGATAAAAATGAAAGATGATTTGAATAGCATAGGGAAAAGTAGCAAACTGAAGCCAGAAGCTGAAGAAAGAGGCCGCCTTGTCAGCATACTTAATTTGGCTCTTCCAAGAAGGAAATCATCAACAGAGGTGTCTGAGAGTGATGCTATAGTTAAGCAAACAAAAGCCATGTTCCGCAATCAAGGGGCAAAAAGGGGGGTATTCCATACATCGCAGAAAGTTGAACTCATAAGGCCTATGGTTGAAGCAGTAGGATGGCCTTTGCTTGCCTCATTTTCTGTAATTATGGAGGAAGGAGAGAACAAGTCAAAGGTTTTACTTTGTATGGAGGGATTTAGGGCTGGAATTCACATTACTCATGTTTTGGGGATGGATACTATGCGTTATGCCTTCCTAACATCCTTAGTCAGATTCACTTTCTTGCACGCCCCAAAGGAAATGCGCAGTAAAAATGTTGAAGCCTTGCGAACTCTGCTAGCACTATGTGATTCTGATCCTGATTCACTCGTGGACACTTGGAATGCCGTTCTAGAATGCATTTCTCGGCTAGAGTTTATCACTTCGAATCCTGCTATTGCTGCAACAGTCATGCAAGCATCAAATCAAATTTCCAGGGATGCACTTCTTCAGTCTCTGAGGGAGTTGGCAGGGAAACCTACAGAACAAGTGTTCTTGAACAGTGTTAAGTTGCCAAGTGATGCAGTTGTTGAGTTTTTTACTGCCCTTTGTGGTGTCTCCGCAGAAGAGCTGAAGCAAACACCTGCTCGTGTTTTTAGCTTACAGAAACTGGTTGAAATCAGCTACTACAACATGGCGCGCATACGTATGGTGTGGGCTAGAATATGGTCTGTCTTGTCAAATCATTTTATATCTGCTGGAAGTCATCATGATGAGAAGGTGGCTATGTACGCTATTGATTCCCTGAGGCAGCTTGGTATGAAGTACTTAGAGCGGGCAGAACTCACCAATTTTACATTCCAAAATGACATCTTGAAGCCATTTGTTATTTTGATGCGGAATAGCAGAAGTGAATCCACACGTAGGCTAATTGTTGATTGCATTGTTCAGATGATAAAATCCAAGGTGGGAAGTATTAAATCTGGCTGGCGAAGTGTATTCATGATTTTCACAGCTGCTGCCGATGATGAGTCAGAACCAATTGTTGAAAGTGCATTTGAAAATGTAGAACAGGTGATCTTGGAACATTTTGATCAAGTGGTTGGGGACTGCTTTATGGACTGTGTCAACTGTCTTATTGGATTTGCCAACAATAAAAGCTCTCATCGTATAAGTCTGAAGGCTATCGCACTGCTGCGTATATGTGAAGATCGACTAGCAGAGGGTCTTGTACCAGGCGGTGCTCTAAAGCCTATTGATGCAAGCCCAGATGCAAGTTTAGATGTAACTGAGCATTACTGGTTCCCAATGTTGGCTGGATTATCAGACTTGACCTCGGATCCAAGGGCGGAGGTCAGAAATTGTGCTCTGGAAGTTCTGTTTGATTTGTTGAATGAGAGAGGTAGCAAGTTCTCATCATCATTCTGGGAGAGTATTTTCCGCCGAGTCCTTTTTCCTATCTTTGATCATGTAAGACATGTTGGAACGGAGGCATCGCTGATTTCTTCTGATGACGAGTGGCTACATGAGACGTGCATACACTCACTACAGTTGCTTTGTAACCTTTTCAATACTTTCTACAAGGAAGTCTGTTTCATGCTGCCACCGTTGCTTAGTTTGCTATTGGATTGTGCCAAAAAGCCAGACCAATCAGTGGTCTCTATCGCACTTGGTGCATTGGTGCATCTCATAGAAGTTGGTGGGCATCAGTTCAGTGACCGTGATTGGGACACCTTGTTGAAAAGCATAAGAGATGCTTCATACACTACCCAGCCACTTGAGCTGCTGAATGATTTGGGTTATCTGCAATCAACTACGCCTAAACATCATGGGGATTTAAAGCCTGACATTGTTGATGGAATTATTAATTCCACTGCCAATGACTCTGGGAATAACAGGCAGGTTGATGACAGTGAAGTTGCTAGTCCATCTCATCTAGGTCGTAGTAATGGTACTTTGTCACTTCAGAATTCAGAAGTATCTGAAGGATTACCATCCCCCTCTGCTAGCTCTCAGAAATCTTCTGATGCTGGGGAGCTTCAACGGAATCAAAGTTTAGGTCAGAGAATAATGGGAAATATGATGGAAAATCGTTTTCTTAGAAGCTTTACCTCCAAGCCTAAATACCAAGACCTTGAAGTTTCCGTGCAATCTCAAACACAGCTGCCTGATGTCGCTGAGTTCGAATCTAAAGATGAAGTAGAGAGCCCAATGCTAGCAACTATTAGGGGCAAATGCATCACTCAATTATTACTTCTGGGTGCAATAGACAGTATTCAGAAAAAATACTGGTCCAAGTTGAAAGAACAGCAAAAGGTCACCATAATGGAAATATTGCTATCGATATTGGATTTTGCTGCTTCATATAACTCATACACTAACCTTAGGTCACGCATGCACCATATTCCTTCAGAAAGGCCTCCCTTGAATCTTCTGCGCCAGGAATTGGCTGGCACCTGTATATACTTGGATATATTACAGAAAACCACTTCGGACCTTGATGATAATGGGGATAACTGTTCAGATCCCGATTCAGTGCAGAAGCTTGACCGGGTAGCGGAAGAGAAACTCGTGTCTTTTTGTGGACATGTGCTGAAAGAGGCATCTGACTTTCAGTCTGCTGTTGGAGAGACTACAAATATGGAGATTCATCGGGTGTTGGAGTTGCGTTCTCCTATAATTGTGAAGGTGATAAATGGCATGATGTCTATGAACAGTCGCATATTCGGAAAACATCTCAGAGAATTTTATCCATTGCTTACCAAACTTGTGTGCTGTGATCAGATGGATGTTCGTGGAGCTGTCGGCAACCTTTTCCGCAGTCAATTAACCTCTCTGTTACCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27940.p1 GENE.S_Transcript_27940~~S_Transcript_27940.p1 ORF type:complete len:1777 (+),score=393.23,Sec7|PF01369.16|8.2e-63,Sec7_N|PF12783.3|1.4e+04,Sec7_N|PF12783.3|1.5e-38,Sec7_N|PF12783.3|9.1e+02,Sec7_N|PF12783.3|1.7e+02,DUF1981|PF09324.6|28,DUF1981|PF09324.6|6.8e+03,DUF1981|PF09324.6|6.9e+03,DUF1981|PF09324.6|2.4e+03,DUF1981|PF09324.6|99,DUF1981|PF09324.6|6.2e-28,DUF1981|PF09324.6|38,DUF1981|PF09324.6|1.2e+04,DCB|PF16213.1|3e-27,DCB|PF16213.1|94,DCB|PF16213.1|2e+02,DCB|PF16213.1|2e+02,Mon2_C|PF16206.1|7.4e+02,Mon2_C|PF16206.1|9.3e-07 S_Transcript_27940:409-5739(+)
MAGAAGGFITRAFDVMLKECSNKKYPSLQSAIQSYLDSTKEENQKTHVEEKVTQPATSTEAAQESEIKSDEGGDKEAAESNESHGTSGGPEPAGKPVQVKVSIAVALSNAGHTLEGPEAELVLNPLRLAFETKNVKVVELALDCLHKLIAYDHLEGDPGLDGGKNAPLFADILSMICSCVDNSSLDSTILQVLKVLLTAVASTKFRVHGEPLLGVIRVCYNIALNSKSPVNQATSKAMLTQMISITFRRMESDPIITHAAKEFQDQSSSGSGTHTEDTSTSNSTTGVEPSSLDGKNEQGMTLGDALSQNPNKDESLVSVEELQNLAGGADIKGLEAMLDKAVHLEDGNKMKHGMDLESMSIGHRDALLLFRTLCKMGMKEDNDEIATKTRILSLELLQGLLEGVSHAFTKNFHFIDSVKAYLSYTLLRASVSSSPVIFQYAAGIFAVLLLRFRESLKGEIGIFFPLIVLRYLDNAECPPTQRLSVLRMLEKVCRDAQMLVDIYVNYDCDLDAPNLFERMVTTLSKIAQGTQVSDPNSVAASQNASVKGSSLQCLVNVLKSLVDWEKSRKELEKQSKGGNSLDEDLSAKDSVDPEGREDVSSNFEKAKAHKSTLEAAVAQFNRQPSKGIEYLISNKLVENTPASVAEFLKNTSNLDKVMIGDFLGQYEDFPLSVMHAYVESMNFSGMMFGAAIREFLSGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYAVIMLNTDAHNPMVSSKMSKADFVCMNTMADAEETPPKELLEELYDSIVKEEIKMKDDLNSIGKSSKLKPEAEERGRLVSILNLALPRRKSSTEVSESDAIVKQTKAMFRNQGAKRGVFHTSQKVELIRPMVEAVGWPLLASFSVIMEEGENKSKVLLCMEGFRAGIHITHVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDSDPDSLVDTWNAVLECISRLEFITSNPAIAATVMQASNQISRDALLQSLRELAGKPTEQVFLNSVKLPSDAVVEFFTALCGVSAEELKQTPARVFSLQKLVEISYYNMARIRMVWARIWSVLSNHFISAGSHHDEKVAMYAIDSLRQLGMKYLERAELTNFTFQNDILKPFVILMRNSRSESTRRLIVDCIVQMIKSKVGSIKSGWRSVFMIFTAAADDESEPIVESAFENVEQVILEHFDQVVGDCFMDCVNCLIGFANNKSSHRISLKAIALLRICEDRLAEGLVPGGALKPIDASPDASLDVTEHYWFPMLAGLSDLTSDPRAEVRNCALEVLFDLLNERGSKFSSSFWESIFRRVLFPIFDHVRHVGTEASLISSDDEWLHETCIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKPDQSVVSIALGALVHLIEVGGHQFSDRDWDTLLKSIRDASYTTQPLELLNDLGYLQSTTPKHHGDLKPDIVDGIINSTANDSGNNRQVDDSEVASPSHLGRSNGTLSLQNSEVSEGLPSPSASSQKSSDAGELQRNQSLGQRIMGNMMENRFLRSFTSKPKYQDLEVSVQSQTQLPDVAEFESKDEVESPMLATIRGKCITQLLLLGAIDSIQKKYWSKLKEQQKVTIMEILLSILDFAASYNSYTNLRSRMHHIPSERPPLNLLRQELAGTCIYLDILQKTTSDLDDNGDNCSDPDSVQKLDRVAEEKLVSFCGHVLKEASDFQSAVGETTNMEIHRVLELRSPIIVKVINGMMSMNSRIFGKHLREFYPLLTKLVCCDQMDVRGAVGNLFRSQLTSLLP*

Click here to download the sequence:
Link to NCBI Protein BLAST