Transcript Information: S_Transcript_27945.p1


Annotated TAIR IDAT3G08780.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; Has 129 Blast hits to 129 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2666376-2667452 | Reverse length=313
E-Value1.3E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8438319430006
Replicate 28.4380493395408
Replicate 38.9948783004227
Condition 2: 8 Hour
Replicate 111.223889640596
Replicate 212.638132038582
Replicate 311.443244503727
Condition 3: 24 Hour
Replicate 19.964332820271
Replicate 28.2703031717197
Replicate 38.3188497336172


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27945.p1 GENE.S_Transcript_27945~~S_Transcript_27945.p1 ORF type:complete len:285 (+),score=38.02 S_Transcript_27945:123-977(+)
ATGGAAGGAGACCTTCCAATCCAGAAAGTAACAGTCTCAGGGCCCACCATATCTTCTCTAATAAACCGGTTCACATCCTCAGAAGGCGACATCTCCGGTCTACTCTTCGGCCATTTCTCTCTCTCCGCTCCTTCTCTCTCCGACGACTCTCCTTCTCCATCTTCCCCTTCCCCTTCCTCTCTCATTGCCACCATCACCTCCTTCATCTCCACCACCACCGCCACCTCCCACCCCAATCACCGCCTCATCGGCTGGTTCTCCGGCCGCCGACGCTCTCCTCTCCGCCCTTCCCTCTCCGACTTCACCTTCTCCCACTCTCTCTCCTCATCTTATTCTCCTGTCATCTTCCTCCTCCTCACCACTCCGTTCCCCGATCCCCAAACCCTAATCCACACTCACGACTACAAGGCCTTCCACTTCAACCCTAACCCTAACTCATTCGACCCGCTCCCGTTGACGATCGTCAACATCGGGCCAGCATTCCGAGGCCAGTACGGCGCGTTCTGCCCTAACTCGCACCTGCCGTACCTGCCCTGCGATCTCCGTGTGGGGTCCCCCATGAGAGAGGACGGAAAGGAAAAGGAGAGAGGGAAGGAGAATTTGGGCCAGATGAAGAAAGTCTCAAAGGACCAGAAGGATCTGGATTGCTATGCGGAGGGATTTCCGGTAGCGAATTTGAACAGGTTGATTGGATCCGAGGCGGTTAGTTATATGTCTGGGCTTGAGGATTTGTATGAGAAGATGCTCACTAGGCTTGATTCCTTGTCTAAGCTTGTTGAGTCCTCTTCTCTCAAGGTCCTTCAACAGGAAAATCACAACATGAAGTTAAGGCACCGGATTGCTGGCATCGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27945.p1 GENE.S_Transcript_27945~~S_Transcript_27945.p1 ORF type:complete len:285 (+),score=38.02 S_Transcript_27945:123-977(+)
MEGDLPIQKVTVSGPTISSLINRFTSSEGDISGLLFGHFSLSAPSLSDDSPSPSSPSPSSLIATITSFISTTTATSHPNHRLIGWFSGRRRSPLRPSLSDFTFSHSLSSSYSPVIFLLLTTPFPDPQTLIHTHDYKAFHFNPNPNSFDPLPLTIVNIGPAFRGQYGAFCPNSHLPYLPCDLRVGSPMREDGKEKERGKENLGQMKKVSKDQKDLDCYAEGFPVANLNRLIGSEAVSYMSGLEDLYEKMLTRLDSLSKLVESSSLKVLQQENHNMKLRHRIAGIE*

Click here to download the sequence:
Link to NCBI Protein BLAST