Transcript Information: S_Transcript_279462.p1


Annotated TAIR IDAT1G67340.1
Annotated Gene NameHCP-like superfamily protein with MYND-type zinc finger
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25230323-25231622 | Forward length=379
E-Value6.4E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9548428178166
Replicate 23.5349220838007
Replicate 34.0757427809062
Condition 2: 8 Hour
Replicate 16.0088116363192
Replicate 24.8822542611558
Replicate 35.5939379073846
Condition 3: 24 Hour
Replicate 14.4051836873298
Replicate 24.4451122152505
Replicate 35.0165392186971


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_279462.p1 GENE.S_Transcript_279462~~S_Transcript_279462.p1 ORF type:complete len:362 (+),score=27.23,Sel1|PF08238.8|12,Sel1|PF08238.8|0.56,Sel1|PF08238.8|0.098,zf-MYND|PF01753.14|1.6e+04,zf-MYND|PF01753.14|1.3e-07 S_Transcript_279462:298-1383(+)
ATGGTTTGCAGGAAAAGGCAGAGAGTTTGTTGTTCAGAACAAGAGAAATCAGACCCCTTTGAGAAATTACATGATGATCTTGTCATCACCATTTTCTCTAAACTCTCCTCTTCTTCTTCTTCCCCTTTTGACTTTATCAGTGTTCTCTTAGTTTGCAAGAGATTTAACCGTTTAGGACTGAATCAAATAGTTCTATCAAAAGCAAATTCAAGATTGTTAGCTATTAAAGCTAAGAACTGGTGTGAATCTGCTCACCGCTTTCTTAAACTCTGCGTTAATGCCGGTTCTGTTGAAGCCTGCTATTTTCTGGGCATGATTCGATTTTACTGCTTGGAGAAAAGGAGCAGTGGCGCGTCATTGATGGCAAAGGCGGCGATTAAATCACACGCGCCGTCACTTTATTCACTGGCTGTGATCCAGTTCAACGGGAGCGGGGGAGCCAAGGGTGACAAAGACCTACGCGCTGGTGTTGCGTTGTGTGCACGCGCCGCTTGTCTTGGCCACGTGGACGCTTTGAGAGAGCTTGGTCACTGCCTTCAAGATGGGTATGGTGTGAAGCAAAATATTGCCGAGGGTCGCAGATTATTGGTCCAGGCTAATGCCCGTGAGCTAGCTTCAATACTCCCCTCGGTCACTTTGTCATCATCTCACCTCTCCAAAACGACGTCGTCTCCCCACCCTAAAATGATTGTGGGTGCGGATGTAGGTGGGTTCGGGTCGGGTTGTTGTACCTTATTAAGTGATTTCGGGTGCAATGTGCCGGCTCCGGAACCGCACCCGGCCAATCGTTTTTTGGCCGAGTGGTTTGCGTTGCGAGGTGGGGAACCGGGTCCCGGTTTAAGATTGTGTTCGCACTCTAAATGCGGGCGACCCGAGACCCGGCCCCACGAGTTTAGGAGGTGCTCCGTGTGTGGGGCTGTTAATTACTGCTCGAGGGGTTGCCAAGCCCTGGATTGGAAGTTGGGGAATTGGAAGTTGGGGCATAAGGTGAAGTGTTCCCCTGTGATTGCGGATGTTTGGGTTAATGTGGACCCACTTGGTGCTAATCAAGATGATATTGATCATAATCACCAAAATGGAAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_279462.p1 GENE.S_Transcript_279462~~S_Transcript_279462.p1 ORF type:complete len:362 (+),score=27.23,Sel1|PF08238.8|12,Sel1|PF08238.8|0.56,Sel1|PF08238.8|0.098,zf-MYND|PF01753.14|1.6e+04,zf-MYND|PF01753.14|1.3e-07 S_Transcript_279462:298-1383(+)
MVCRKRQRVCCSEQEKSDPFEKLHDDLVITIFSKLSSSSSSPFDFISVLLVCKRFNRLGLNQIVLSKANSRLLAIKAKNWCESAHRFLKLCVNAGSVEACYFLGMIRFYCLEKRSSGASLMAKAAIKSHAPSLYSLAVIQFNGSGGAKGDKDLRAGVALCARAACLGHVDALRELGHCLQDGYGVKQNIAEGRRLLVQANARELASILPSVTLSSSHLSKTTSSPHPKMIVGADVGGFGSGCCTLLSDFGCNVPAPEPHPANRFLAEWFALRGGEPGPGLRLCSHSKCGRPETRPHEFRRCSVCGAVNYCSRGCQALDWKLGNWKLGHKVKCSPVIADVWVNVDPLGANQDDIDHNHQNGS*

Click here to download the sequence:
Link to NCBI Protein BLAST