Transcript Information: S_Transcript_279463.p1


Annotated TAIR IDAT5G50450.1
Annotated Gene NameHCP-like superfamily protein with MYND-type zinc finger
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20543519-20544698 | Reverse length=336
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1578109109606
Replicate 22.6833122434815
Replicate 31.3707438981055
Condition 2: 8 Hour
Replicate 11.5849952262734
Replicate 22.4185782313218
Replicate 33.0245459439501
Condition 3: 24 Hour
Replicate 12.0664078977589
Replicate 23.2158111020493
Replicate 32.0450306274419


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_279463.p1 GENE.S_Transcript_279463~~S_Transcript_279463.p1 ORF type:internal len:148 (+),score=19.58 S_Transcript_279463:3-443(+)
AGTCAAAAAAAAAAGCCACAGAAAACCAAAAAGGGTTCTCATTCATTTCCATCAAGACATGACCAAAAATTGAAGATTTTTCTCAACAACATCAACACAAGAAAAAAACAAAGAAAAGGGGTGATGGTTTGCAGGAAAAGGCAGAGAGTTTGTTGTTCAGAACAAGAGAAATCAGACCCCTTTGAGAAATTACATGATGATCTTGTCATCACCATTTTCTCTAAACTCTCCTCTTCTTCTTCTTCGTTCCCTTTTGACTTTATCAGTGTTCTCTTAGTTTGCAAGAGATTTAACCGTTTGGGACTGAACCAAATAGTTCTATCAAAAGCAAATTCAAGATTGTTAGCTATTAAAGCTAAGAACTGGTGTGAATCTGCTCACCGCTTTCTTAAACTCTGCGTTAATGCCGGTTCTGTTGAAGCCTGCTATTTTCTGGGCATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_279463.p1 GENE.S_Transcript_279463~~S_Transcript_279463.p1 ORF type:internal len:148 (+),score=19.58 S_Transcript_279463:3-443(+)
SQKKKPQKTKKGSHSFPSRHDQKLKIFLNNINTRKKQRKGVMVCRKRQRVCCSEQEKSDPFEKLHDDLVITIFSKLSSSSSSFPFDFISVLLVCKRFNRLGLNQIVLSKANSRLLAIKAKNWCESAHRFLKLCVNAGSVEACYFLGM

Click here to download the sequence:
Link to NCBI Protein BLAST