Transcript Information: S_Transcript_279701.p1


Annotated TAIR IDAT5G38600.1
Annotated Gene NameProline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15457386-15460466 | Forward length=532
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.82477717972018
Replicate 30.34472403894581
Condition 2: 8 Hour
Replicate 10
Replicate 21.0454134878377
Replicate 30.19921352901852
Condition 3: 24 Hour
Replicate 10.40831557926344
Replicate 20.42362264628687
Replicate 30.70716012350793


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_279701.p1 GENE.S_Transcript_279701~~S_Transcript_279701.p1 ORF type:5prime_partial len:107 (+),score=11.97 S_Transcript_279701:2-322(+)
TTTGGTGACGAGGAACCTCATGATACGGCCTTGAAGAATGGCCTTCCATTAGATTCACAAAAATCCAAGATTGTAAATGTCCCAGGAATTAATACCCTTATACCAGAAAACGCTGATCAGTGGCGTTGGGTAGCACCAGCTTCTACACCTAGTTGTCCACCGCATTATGATTTTCCTGGAACCAGTCTCACAGCAGACAGCATTATTCTCAATAATGGGCATTTTCATGGTGATTATAGACAGAGAAATTACGCTCAAACCCCATTGTATCACTTTGTCCCTGGATCAAGCCCCCCTCCCTGTATCTCACTTTCGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_279701.p1 GENE.S_Transcript_279701~~S_Transcript_279701.p1 ORF type:5prime_partial len:107 (+),score=11.97 S_Transcript_279701:2-322(+)
FGDEEPHDTALKNGLPLDSQKSKIVNVPGINTLIPENADQWRWVAPASTPSCPPHYDFPGTSLTADSIILNNGHFHGDYRQRNYAQTPLYHFVPGSSPPPCISLST*

Click here to download the sequence:
Link to NCBI Protein BLAST