Transcript Information: S_Transcript_27976.p1


Annotated TAIR IDAT5G20300.1
Annotated Gene NameAvirulence induced gene (AIG1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6853544-6856332 | Reverse length=793
E-Value4.1E-275
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.0775676285
Replicate 232.848399655749
Replicate 332.292916654902
Condition 2: 8 Hour
Replicate 143.852604728154
Replicate 244.333204643862
Replicate 344.224097979929
Condition 3: 24 Hour
Replicate 140.826741622002
Replicate 239.535430154808
Replicate 338.213215376559


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27976.p1 GENE.S_Transcript_27976~~S_Transcript_27976.p1 ORF type:complete len:763 (+),score=143.15,TOC159_MAD|PF11886.4|1e-112,AIG1|PF04548.12|1.1e-24,MMR_HSR1|PF01926.19|3.1e-11,Septin|PF00735.14|9.8e-06,DUF258|PF03193.12|1.3e-05 S_Transcript_27976:643-2931(+)
ATGAGCCATCATGGGAGTGGTTCAACACAAACTGCTGGTGGAGTGGCATCACAAGCGCATCCAGATACAACACGGTCTTCTAGCAGTCAAGAAGGCCCAATAGGTCCCACTTTGCAGCAAGTTCGTGATGTGGATACCACTTCCCATTATGACTCTACTGGTCAGAAGAAGTTGGATCCGTTGTCAGAAATTCAGGCCCTTCAGATCAAGTTTTTCCGTACTCTACAACGGCTTGGACAATCGCCAGAAGATATTGTCGTTGCTAAGGTCCTATACCGGATGCATTTAGCAACATTAGTCAGAGTAGGGGAGTCAGATTTGAAAAGGATTAATCTCAGAAGTGATAAAACCAGAGCTTTAGCAGCACAACAGGAAGCCGCTGGCCTCCCGATAGGGGACTTTTCTCTGAGGATACTCGTCTTGGGGAAGACTGGTGTAGGTAAGAGTGCAACCATCAACTCTCTTTTTAATCAGAAGAAGGCTCTCACTAATGCTTTTCGGCCTTCTACTAAGCGCATTCAAGAAGTTACCGGAGATGTGAATGGTGTTAAAATTACAGTTGTTGATACTCCTGGTTTCCTGCCTTCCTTTGCAAGCAATGTACGAAGGAACAGGAAGATTATGCTTTCTATCAAAAAGTATGTTCAAAGATATCCACCAGATGTTGTTTTGTATGTTGAACGTCTGGATACCATGGCCAAGGGTTACAATGACTTCCCTCTCTTGAGGCTTATAACTGAGGTTTTTGGGTCTGCAATATGGTTCAACACTATACTTGTCATGACACATGCTGCAGCCGCTCTTCCCGAGGGACCCAATGGGTTTCCCATTGCGTACGAGTCTTATGTTCACTATTCCACAGATGTGTTACAACGTTATGTACAGATAGCTATATCTGATGCAAAACTTGAGAACCCTGTAGTTTTGGCTGACAACCATCCGAAGTGTAGGACTAACATCACCGGTGAGAAAATTCTCCCAAATGGACAGGTCTGGCGACAACAGTTGCTGTTATTGTGCCTGTGCACAAAGGTACTCGGTGATGCCAATGCTCTGCTGGGACTCCAAGACAGCATTGAACTCGGGCCATCTAGTAACTCTCGGCTGGCTTCACTTCCTCATCTGCTTTCATCTTTTCTACGGCAGCGCTCTGTAGTGACTTCAGATGGAAGAGATGAGGCTGATGAGTATTGTCTTTTAGATGGTGAATCAGATGAGGAAGAATACGATCAACTGCCTCCAATTCGCATTCTGACAAAGATGCAGTATGAGAAATTGAGCAATGATCAGAAAAGATATTATCTTGATGAGCTGGATTATCGAGAAACACTGTTTTTGAAGAAGCAACTGAAGGAGGAATTACGTAAGAGGATAGAAAGACAGATGTCTGAGGGGGAAAACTTGTCGAGTGAGGGTAGTGTTGATGGTCCAGAAGCATTTCCAGAGGCCGTTCCACTGCCTGATATGGCAATCCCTCCAACTTTTGACTCCGATTCTCCTGTACATAGGTATAGAGGGGTAGTCACGAGTGACCAGTGGCTTTGGAGACCTCTGGTAGATCCCCATGGATGGGACCATGATATAGGTTATGATGGAGTAAACCTGGAAACAGCTTTTGAAATCAAAAAGAACTTGACTGCCTCGATCTCAGGACAGATGAGCAAGGACAAGCATGATTTGAGTATTCACTCTGAGTGCAACGCAGCTTATGCAGATCCCAAGGGCCCCGTCTACTCTGCAGGTCTTGACATTCAATCTTCTGGTAAGGATATGGTGTACACTCTCCACAGCCATGCAAATTTGAGGAACCTGAAGCATAACGTCACAGGATGTGGAATTTCGGTGACAACATTCCAGAAGAAGTGTTACATTGGTGCTAAGGTTGAAGATACCCTTCATGTAGGAAAGAGGCTTAAGTTTGCGATGAATGCTGGTCGATTGGGAGGTAGTGGGCAGGCCGCGTATGGTGGGAGCCTCGAAGCAACTGTACGAGGGAGAGACTACCCTGTGAGGAATGATAAGGTCAGCATGGCAATGACAGTTCTGTCTTTCAATAAAGATTTGGTTCTAGGTGCAAATGTTGAGTCCGAGTTCCGACCAATTCGGAGTCTGAGAGTGGCAGTTAATGCAAACCTAAATAGCCGAAATATGGGGCAAGTTTCTATCAGAACAAGCAGTTCTGAGCATGTGGAAATATGTGCCATTGCACTTTTCACTATTCTGAGGGCTCTTTTCCGGAGAAGGGAACCCGGTTCTCCTCCTCCTATTGAGGCTCAGGACGTAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27976.p1 GENE.S_Transcript_27976~~S_Transcript_27976.p1 ORF type:complete len:763 (+),score=143.15,TOC159_MAD|PF11886.4|1e-112,AIG1|PF04548.12|1.1e-24,MMR_HSR1|PF01926.19|3.1e-11,Septin|PF00735.14|9.8e-06,DUF258|PF03193.12|1.3e-05 S_Transcript_27976:643-2931(+)
MSHHGSGSTQTAGGVASQAHPDTTRSSSSQEGPIGPTLQQVRDVDTTSHYDSTGQKKLDPLSEIQALQIKFFRTLQRLGQSPEDIVVAKVLYRMHLATLVRVGESDLKRINLRSDKTRALAAQQEAAGLPIGDFSLRILVLGKTGVGKSATINSLFNQKKALTNAFRPSTKRIQEVTGDVNGVKITVVDTPGFLPSFASNVRRNRKIMLSIKKYVQRYPPDVVLYVERLDTMAKGYNDFPLLRLITEVFGSAIWFNTILVMTHAAAALPEGPNGFPIAYESYVHYSTDVLQRYVQIAISDAKLENPVVLADNHPKCRTNITGEKILPNGQVWRQQLLLLCLCTKVLGDANALLGLQDSIELGPSSNSRLASLPHLLSSFLRQRSVVTSDGRDEADEYCLLDGESDEEEYDQLPPIRILTKMQYEKLSNDQKRYYLDELDYRETLFLKKQLKEELRKRIERQMSEGENLSSEGSVDGPEAFPEAVPLPDMAIPPTFDSDSPVHRYRGVVTSDQWLWRPLVDPHGWDHDIGYDGVNLETAFEIKKNLTASISGQMSKDKHDLSIHSECNAAYADPKGPVYSAGLDIQSSGKDMVYTLHSHANLRNLKHNVTGCGISVTTFQKKCYIGAKVEDTLHVGKRLKFAMNAGRLGGSGQAAYGGSLEATVRGRDYPVRNDKVSMAMTVLSFNKDLVLGANVESEFRPIRSLRVAVNANLNSRNMGQVSIRTSSSEHVEICAIALFTILRALFRRREPGSPPPIEAQDVG*

Click here to download the sequence:
Link to NCBI Protein BLAST