Transcript Information: S_Transcript_279920.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53615936554393
Replicate 20.88897686861781
Replicate 30
Condition 2: 8 Hour
Replicate 11.6404146397795
Replicate 21.3111706162477
Replicate 31.2883204596417
Condition 3: 24 Hour
Replicate 11.0402325471711
Replicate 21.4112996219703
Replicate 30.92388441044381


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_279920.p1 GENE.S_Transcript_279920~~S_Transcript_279920.p1 ORF type:complete len:546 (+),score=74.30,RVT_1|PF00078.23|1.3e-15,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|4.6e-15 S_Transcript_279920:231-1868(+)
ATGATTGTGTCATTTTATCAAATAGAGTGCAAGTTATTTATATCTCAAATCCCCTACCCAATTAGCCCTCACGCTTGCCGTCAACACCACTGTTTTCCACCATGGACTCTCTCCATCACCGCTTGTCAGAACCATGACTCACCACCACCGCCTCTAAGTTACTCAAAATGGAGCAAACTCACAAAGAAGATTGAAGCTCAGAAGGGTTTGAGGCAGGGGGATCCTCTTTCCCCAGCTTTGTTTGTTATTGCCATGGAATACTTATCTAGATGTATGGATGAGCTTAATGATGACAAAGAGTTCCACTATCATCCTAAATGCAAAAAGATCAAGCTAACCCACCTATGTTTTGCAGACGATATTATGCTCTTTACCAAAGGGGATTTGCAATCTATTTCTTTGTTACACAATGCTTTCACAAAGTTTTCTGATGCTTCAGGTTTGCAGGCCAATTTGGGGAAAAGTTCCATCTTCTTTGGGGGAGTTACTGAGGAGAGTAAAGCTGACATCTTGCTGAAACTTGGATACCAATCTGGTACTCTTCCAGTTAGGTATCTAAGTATTCCTCTAACCCATAAAAAAGTGACCATAGCTCAGTGCAAGCCTACTACAGACAAGATCCTGGCTAGAATCAACACTTGGGCTTCAAGAATGTTATCATATGCTGGTAGATTGCAGATTATAAAGTCATTTATATTTGGAATTCAAGCTTTCTGGGCTCAGATTATGATTTTTCCAAAGAAAGTTTTGAGGATGATTGAAAGTGAATGCTTGAAATTCTTATGGTCTGGGGTTGATAACATGAGGCATCCTGCAAAAATTGCTTGGAGTAAAGTATGCTCCCCAAAGAGTGCTGGTGGGCTGAACATTATGGATCTTTGCACTTGGAACAAAGCTGCTATTTTCAAGCTGTTTTGGGCAGTACACCAAAAAAAAGACACTATGTGGATTCAATGGCTGCATAGTTACTTCTTAAAAGGCAGGAGCTTGATTAATGTGAAAATTTCTGATAATTTATCCTGGATGATGAGGAATATTCTGCATGCTAGAGAGCTCATGGTTAGCATTCAACCTAAAATACATGATGATATAAAAATTAAGGAGATTTATAAACTCTTTCAGGGTGAGTTTGATAAAGTCTATTGGAGAAATATTGTATGCAATAACATGGCTAGACCAAAAGCAGTTTTTTCCACTTGGCTGTTATTGCATAGAAGACATTTTATAGTGGACAGATTGCTAAAATGGGGAATTTTGTGTGATACTAATTGTCTGTTGTGTAAAGCTAAGAATGAGACTCATGAACATCTTTTTGTGGAGTGTCATTATGTCAGGAGAGTTTGGGAAGGAGTCCTCAATGGACTGAGATATCCTGCACCTTTCAGGTTGATCCCTCAATCCTGGAATGCTGCAATTAAGTGGATGCAGAAGAAATGCAAGGGTAGAAAACCTATTGCAATGCTGTTCAAAATGTGTATTGTGGAGATCTGGTATGGTATCTGGTGTGAAAGAAATATGAGAAGATTTCAGAAGGAGGAACTCGATGGACAGGTGGTCATTAAGCAAGTTCTCTATGCAGTTTTGATTAGAGCTTATAGTGTCCCTAAGCTTAGCCAGGTTCTTGATTCCGTTCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_279920.p1 GENE.S_Transcript_279920~~S_Transcript_279920.p1 ORF type:complete len:546 (+),score=74.30,RVT_1|PF00078.23|1.3e-15,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|4.6e-15 S_Transcript_279920:231-1868(+)
MIVSFYQIECKLFISQIPYPISPHACRQHHCFPPWTLSITACQNHDSPPPPLSYSKWSKLTKKIEAQKGLRQGDPLSPALFVIAMEYLSRCMDELNDDKEFHYHPKCKKIKLTHLCFADDIMLFTKGDLQSISLLHNAFTKFSDASGLQANLGKSSIFFGGVTEESKADILLKLGYQSGTLPVRYLSIPLTHKKVTIAQCKPTTDKILARINTWASRMLSYAGRLQIIKSFIFGIQAFWAQIMIFPKKVLRMIESECLKFLWSGVDNMRHPAKIAWSKVCSPKSAGGLNIMDLCTWNKAAIFKLFWAVHQKKDTMWIQWLHSYFLKGRSLINVKISDNLSWMMRNILHARELMVSIQPKIHDDIKIKEIYKLFQGEFDKVYWRNIVCNNMARPKAVFSTWLLLHRRHFIVDRLLKWGILCDTNCLLCKAKNETHEHLFVECHYVRRVWEGVLNGLRYPAPFRLIPQSWNAAIKWMQKKCKGRKPIAMLFKMCIVEIWYGIWCERNMRRFQKEELDGQVVIKQVLYAVLIRAYSVPKLSQVLDSVL*

Click here to download the sequence:
Link to NCBI Protein BLAST