Transcript Information: S_Transcript_279922.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value9E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46418025410198
Replicate 20.47033078514082
Replicate 30.857801678307
Condition 2: 8 Hour
Replicate 10
Replicate 20.47691925394766
Replicate 30.41309782180196
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 31.3686380684947


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_279922.p1 GENE.S_Transcript_279922~~S_Transcript_279922.p1 ORF type:complete len:516 (+),score=78.91,RVT_1|PF00078.23|1.9e-16,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|4.2e-15 S_Transcript_279922:541-2088(+)
ATGTTTTTCAACACTAAAATGTTGATTTTGGCCGGTGTTATGGCCTGTGTTATGTCTGTGAGTTATGTGCTGAATGTGGATGGGGAATTCTTGCAGAAGATTGAAGCTCAGAAGGGTTTGAGGCAGGGGGATCCTCTTTCCCCAGCTTTGTTTGTTATTGCCATGGAATACTTATCTAGATGTATGGATGAGCTTAATGATGACAAAGAGTTCCACTATCATCCTAAATGCAAAAAGATCAAGCTAACCCACCTATGTTTTGCAGACGATATTATGCTCTTTACCAAAGGGGATTTGCAATCTATTTCTTTGTTACACAATGCTTTCACAAAGTTTTCTGATGCTTCAGGTTTGCAGGCCAATTTGGGGAAAAGTTCCATCTTCTTTGGGGGAGTTACTGAGGAGAGTAAAGCTGACATCTTGCTGAAACTTGGATACCAATCTGGTACTCTTCCAGTTAGGTATCTAAGTATTCCTCTAACCCATAAAAAAGTGACCATAGCTCAGTGCAAGCCTACTACAGACAAGATCCTGGCTAGAATCAACACTTGGGCTTCAAGAATGTTATCATATGCTGGTAGATTGCAGATTATAAAGTCATTTATATTTGGAATTCAAGCTTTCTGGGCTCAGATTATGATTTTTCCAAAGAAAGTTTTGAGGATGATTGAAAGTGAATGCTTGAAATTCTTATGGTCTGGGGTTGATAACATGAGGCATCCTGCAAAAATTGCTTGGAGTAAAGTATGCTCCCCAAAGAGTGCTGGTGGGCTGAACATTATGGATCTTTGCACTTGGAACAAAGCTGCTATTTTCAAGCTGTTTTGGGCAGTACACCAAAAAAAAGACACTATGTGGATTCAATGGCTGCATAGTTACTTCTTAAAAGGCAGGAGCTTGATTAATGTGAAAATTTCTGATAATTTATCCTGGATGATGAGGAATATTCTGCATGCTAGAGAGCTCATGGTTAGCATTCAACCTAAAATACATGATGATATAAAAATTAAGGAGATTTATAAACTCTTTCAGGGTGAGTTTGATAAAGTCTATTGGAGAAATATTGTATGCAATAACATGGCTAGACCAAAAGCAGTTTTTTCCACTTGGCTGTTATTGCATAGAAGACATTTTATAGTGGACAGATTGCTAAAATGGGGAATTTTGTGTGATACTAATTGTCTGTTGTGTAAAGCTAAGAATGAGACTCATGAACATCTTTTTGTGGAGTGTCATTATGTCAGGAGAGTTTGGGAAGGAGTCCTCAATGGACTGAGATATCCTGCACCTTTCAGGTTGATCCCTCAATCCTGGAATGCTGCAATTAAGTGGATGCAGAAGAAATGCAAGGGTAGAAAACCTATTGCAATGCTGTTCAAAATGTGTATTGTGGAGATCTGGTATGGTATCTGGTGTGAAAGAAATATGAGAAGATTTCAGAAGGAGGAACTCGATGGACAGGTGGTCATTAAGCAAGTTCTCTATGCAGTTTTGATTAGAGCTTATAGTGTCCCTAAGCTTAGCCAGGTTCTTGATTCCGTTCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_279922.p1 GENE.S_Transcript_279922~~S_Transcript_279922.p1 ORF type:complete len:516 (+),score=78.91,RVT_1|PF00078.23|1.9e-16,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|4.2e-15 S_Transcript_279922:541-2088(+)
MFFNTKMLILAGVMACVMSVSYVLNVDGEFLQKIEAQKGLRQGDPLSPALFVIAMEYLSRCMDELNDDKEFHYHPKCKKIKLTHLCFADDIMLFTKGDLQSISLLHNAFTKFSDASGLQANLGKSSIFFGGVTEESKADILLKLGYQSGTLPVRYLSIPLTHKKVTIAQCKPTTDKILARINTWASRMLSYAGRLQIIKSFIFGIQAFWAQIMIFPKKVLRMIESECLKFLWSGVDNMRHPAKIAWSKVCSPKSAGGLNIMDLCTWNKAAIFKLFWAVHQKKDTMWIQWLHSYFLKGRSLINVKISDNLSWMMRNILHARELMVSIQPKIHDDIKIKEIYKLFQGEFDKVYWRNIVCNNMARPKAVFSTWLLLHRRHFIVDRLLKWGILCDTNCLLCKAKNETHEHLFVECHYVRRVWEGVLNGLRYPAPFRLIPQSWNAAIKWMQKKCKGRKPIAMLFKMCIVEIWYGIWCERNMRRFQKEELDGQVVIKQVLYAVLIRAYSVPKLSQVLDSVL*

Click here to download the sequence:
Link to NCBI Protein BLAST