Transcript Information: S_Transcript_279925.p1


Annotated TAIR IDAT2G05100.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.1
Annotated Gene Symbol(s)LHCB2.1, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1823449-1824331 | Reverse length=265
E-Value2E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1189.12217899043
Replicate 2202.16400076815
Replicate 3197.24571641184
Condition 2: 8 Hour
Replicate 177.134390508779
Replicate 277.270143883311
Replicate 392.066320506622
Condition 3: 24 Hour
Replicate 1258.11046734276
Replicate 2290.45040793234
Replicate 3236.1212667713


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_279925.p1 GENE.S_Transcript_279925~~S_Transcript_279925.p1 ORF type:3prime_partial len:141 (+),score=15.49,Chloroa_b-bind|PF00504.17|8.2e-18 S_Transcript_279925:221-640(+)
ATGGCTACCTCTACAATCCAACAATCTGCATTTGCTGGACAAACTGTCTTCAAGCAGCAGAACGAGCTTGTCCGCAAGGTCGGTGGCAATGGCGGCCGTGTCTCCATGCGCCGCACCATCAAGAGCGCTCCTGCGAGCATGTGGTACGGTCCAGACCGCCCAAAGTTCTTGGGTCCATTCTCAGAGCAAACCCCATCATACCGAACATGTGAATTCCCCGGTGACTATGGTTGGGACACGGCGGGATTGTCAGCAGACCCAGAGACGTTCGCGAAGAACCGTGAGCTGGAGGGGGTCCACGGCAGATGGGCCATGTTGGGGGGTTTGGGCTGTGTGTTCCCTGAAGTCCGCTCCAAGAACGGAGGCAAGTTCGGTGAGGCAGTTTGGTTCAGGGCAGGAGCCCAAATCTTCCAAGAAGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_279925.p1 GENE.S_Transcript_279925~~S_Transcript_279925.p1 ORF type:3prime_partial len:141 (+),score=15.49,Chloroa_b-bind|PF00504.17|8.2e-18 S_Transcript_279925:221-640(+)
MATSTIQQSAFAGQTVFKQQNELVRKVGGNGGRVSMRRTIKSAPASMWYGPDRPKFLGPFSEQTPSYRTCEFPGDYGWDTAGLSADPETFAKNRELEGVHGRWAMLGGLGCVFPEVRSKNGGKFGEAVWFRAGAQIFQEV

Click here to download the sequence:
Link to NCBI Protein BLAST