Transcript Information: S_Transcript_28001.p1


Annotated TAIR IDAT4G16845.1
Annotated Gene NameVEFS-Box of polycomb protein
Annotated Gene Symbol(s)VRN2
Annotation TypeOrtholog
Chromosome Positionchr4:9476708-9479725 | Forward length=440
E-Value7.9E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.699756124351
Replicate 211.428207540583
Replicate 39.1108000796684
Condition 2: 8 Hour
Replicate 111.046245344126
Replicate 213.734276383142
Replicate 310.836833794379
Condition 3: 24 Hour
Replicate 110.896248839433
Replicate 211.413430290247
Replicate 311.068666969152


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28001.p1 GENE.S_Transcript_28001~~S_Transcript_28001.p1 ORF type:3prime_partial len:417 (+),score=72.61,VEFS-Box|PF09733.5|2.1e-60 S_Transcript_28001:249-1496(+)
ATGTGCCATCAAAGTTCATGTCCGTGTGTAACAGTAGAAGAAGCTGTTGCCGCTGAAGAATGTTTATTAGTATACTGCAAGCCTGTTGAATTATATAATATACTTCAACGCCGTGCTCTTCGAAATCCGTCATACTTGCCGAGATGCCTGAATTACAAAGTCGAGGCAAAATGGAGAACAGGGTTGGTAGATGGAAATGTAATTTTCAACTACAGAGATCAGAACAACTTACTGAGGAAGACTGAAGTGACCAGACTATTCTCATGTGCTTTTTGCTTGATGCGATGTGGAAGCTTCAAGGGCCTACGTTGTCATTTGATCACATCACATGACCTTTTGAAATGTGAATTCTGGGTGACTGAAGAGTATAAAGCTGTTAATGTATCTGTTAAAACTGATGCACTGCTTTCCGAGACTACTGCTGGTGAAATTGACCCCCAGTTGCAGTCGTTTTGTTTCTGTTCAAAGCCACGAAAGCGTAAAAGACCAGAAGATCCACTAGAAAAAGGCAAATATGTATATCCACTTGTGTTGGAGCCTGCAGTAGCAACTGAAGGGTTGCATAAGGGTCTGCTTGAAGGTGATGGAGGGGAGAAATATCCCAGCTCGTGTCCTAATGGTAGAGAATTGCATAGTTCAAGGCTCTTGGGGGATAATCATTGTCGAAATGAAAATGGTAATGCGAATGGCTCAGACTGTATTGCAGCTAACACCAATGCAGGTGTTCCAGTGGCTAGAGCTCAGTCACTTGAAGACTTGGACTGTGCGCAAAGTATACCTCTGGACAAGAATATAGCTCCTACACTGCTGCCAAATTCAAAATCAAGAAAGCTATCTCATGAACGCACAGATCCTAAAAGCTCGACACTCCTGCAGAAGCGACAATTTTATCATTCTCACAGAGCTCAGCCAATGGCCCTGGAGCAAGTATTGTCAGATAGGGATAGTGAAGATGAAGTTGACGATGATATTTCTGGCCTTGAAGATAGACGGATGCTTGATGATTTTGTAGATGTGACCAAGGATGAAAAGCACCTGATGCATCTGTGGAACTCATTTGTTAGAAAACAAAGGGTTCTGGCAGATGGTCATGTTCCCTGGGCTTGTGAGGCATTTCTACGACTTCATGGAAAGAAATTAATTCAGTCACCAACTCTCTTCTGGTGCTGGAGGTTGTTTATGATCAAACTCTGGAATCATGGCCTTCTTGATGCATGCACAATGAACAACTGCAGCATGATTCTCCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28001.p1 GENE.S_Transcript_28001~~S_Transcript_28001.p1 ORF type:3prime_partial len:417 (+),score=72.61,VEFS-Box|PF09733.5|2.1e-60 S_Transcript_28001:249-1496(+)
MCHQSSCPCVTVEEAVAAEECLLVYCKPVELYNILQRRALRNPSYLPRCLNYKVEAKWRTGLVDGNVIFNYRDQNNLLRKTEVTRLFSCAFCLMRCGSFKGLRCHLITSHDLLKCEFWVTEEYKAVNVSVKTDALLSETTAGEIDPQLQSFCFCSKPRKRKRPEDPLEKGKYVYPLVLEPAVATEGLHKGLLEGDGGEKYPSSCPNGRELHSSRLLGDNHCRNENGNANGSDCIAANTNAGVPVARAQSLEDLDCAQSIPLDKNIAPTLLPNSKSRKLSHERTDPKSSTLLQKRQFYHSHRAQPMALEQVLSDRDSEDEVDDDISGLEDRRMLDDFVDVTKDEKHLMHLWNSFVRKQRVLADGHVPWACEAFLRLHGKKLIQSPTLFWCWRLFMIKLWNHGLLDACTMNNCSMILQ

Click here to download the sequence:
Link to NCBI Protein BLAST