Transcript Information: S_Transcript_280020.p1


Annotated TAIR IDAT5G56940.1
Annotated Gene NameRibosomal protein S16 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23030879-23032200 | Forward length=135
E-Value9.6E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.733449895474
Replicate 212.60730831858
Replicate 316.811745817704
Condition 2: 8 Hour
Replicate 127.70850034403
Replicate 223.741553658485
Replicate 322.910911031204
Condition 3: 24 Hour
Replicate 112.928604514841
Replicate 210.021413282058
Replicate 311.838918802401


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280020.p1 GENE.S_Transcript_280020~~S_Transcript_280020.p1 ORF type:complete len:147 (+),score=19.08,Ribosomal_S16|PF00886.15|2.6e-27 S_Transcript_280020:145-585(+)
ATGGTGGTGAGGATTAGATTATCAAGATTTGGCTGCAAAAACAAGCCCTTTTACAGGGTTATGGCTGCTGATAGTAGGTCTCCTAGAGATGGCAAACACTTGGAGGTTTTGGGTTACTATAACCCTCTTCCAGGTCAGGATGGGCAAAAGCGTATGGGGCTTAATTTCGATAGAGTCAAATACTGGCTCTCAGTTGGAGCTCAGCCATCAGATCCTGTCCAACGTATTCTATTCAGAGCAGGGTTGCTACCTCCACCCCCAATGCTAGCAATGGGACGCAAAGGCGGGCCACGTGATACTCGACCTGTAGATCCAATGACTGGACGTGTTCTGATTACGGAGAAGCCTAGCAGCTCAGCAGACACTAGCGTCTCCAAAATTGAGGGCGTAGATATAGTAGATACCCGTCAACATCATGAGGCACTTCTTTCACACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280020.p1 GENE.S_Transcript_280020~~S_Transcript_280020.p1 ORF type:complete len:147 (+),score=19.08,Ribosomal_S16|PF00886.15|2.6e-27 S_Transcript_280020:145-585(+)
MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGQKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPPPMLAMGRKGGPRDTRPVDPMTGRVLITEKPSSSADTSVSKIEGVDIVDTRQHHEALLSHI*

Click here to download the sequence:
Link to NCBI Protein BLAST