Transcript Information: S_Transcript_280135.p3


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value6E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60484093716319
Replicate 20.37607027654855
Replicate 30.4191530928091
Condition 2: 8 Hour
Replicate 10.96933592350605
Replicate 21.2711277636208
Replicate 30.48445108193139
Condition 3: 24 Hour
Replicate 10.8688305933759
Replicate 20.90140159678654
Replicate 30.28661414096723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280135.p3 GENE.S_Transcript_280135~~S_Transcript_280135.p3 ORF type:complete len:176 (+),score=19.85,zf-RVT|PF13966.2|3.2e-21 S_Transcript_280135:3260-3787(+)
ATGAACATCAGGAACTCAGGTATTGCTAACAATGGTACTTGGCCTATCTCTCCTAAAGGCAAATATTCCATTAAGAAGGCATATCATATCATGATGGGCTCTCATGAGAAATGCTGGTTTGCTGCTATGGTATGGGGTAGATACACAATGCCTAAACATGCTCTTTTTATGTGGTTGGCTACTCAAGCCAGGCTGTTGACTAAAGACAGGCTGATTAATTTCAAAATGCAAGGCATAGACCCTCTTTGTGTGTTCTGTCAGCAAGATGCAGAAACCCATGCACACTTATTCTTCAAGTGCCAATTTTCAGCTGCTGTTTTGAAGATTATAGGCCAATGGTTACAAATAGGGTGCTGTCAAGTGGAGTATGGCAAATGGCCACTCTGGATTACCAGGAGGAAACAAAATAAATACAGGAAATGGATCTATTATGCAGGGGTGGCAGCCTCTATATATTACATTTGGAGAAGCAGGAACCTCATCATTTTCCAGAACCAGAGTTGCAAACCTGAAGATATAGCTGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280135.p3 GENE.S_Transcript_280135~~S_Transcript_280135.p3 ORF type:complete len:176 (+),score=19.85,zf-RVT|PF13966.2|3.2e-21 S_Transcript_280135:3260-3787(+)
MNIRNSGIANNGTWPISPKGKYSIKKAYHIMMGSHEKCWFAAMVWGRYTMPKHALFMWLATQARLLTKDRLINFKMQGIDPLCVFCQQDAETHAHLFFKCQFSAAVLKIIGQWLQIGCCQVEYGKWPLWITRRKQNKYRKWIYYAGVAASIYYIWRSRNLIIFQNQSCKPEDIAA*

Click here to download the sequence:
Link to NCBI Protein BLAST