Transcript Information: S_Transcript_280186.p1


Annotated TAIR IDAT5G11600.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3733815-3735015 | Reverse length=242
E-Value6.4E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.042243190587
Replicate 222.774492446467
Replicate 320.128362499844
Condition 2: 8 Hour
Replicate 129.007116936745
Replicate 224.65714500615
Replicate 324.41008354764
Condition 3: 24 Hour
Replicate 119.848308117798
Replicate 217.546176704269
Replicate 324.001622901643


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280186.p1 GENE.S_Transcript_280186~~S_Transcript_280186.p1 ORF type:complete len:186 (+),score=52.60 S_Transcript_280186:269-826(+)
ATGGCAAGTGCAGCTGTGAAGAAACCCATCAGTAATCAAGCAGGTCCTTCAAAGGGGAAGGTTGATGTCAAACCAATTCTAAAAAAGACAATTGAAAGTAGTTCAACCAAACAGCAATCAGCTATATCTTCAAAACCTCAGGACAAAGGGAAATCAACTACACCGACGACGTCAACAGGGACGAAGCCCAAAAGACAGAAGAAGGTTTACAGTTTGCCAGGACAAAAATATGACGTTCCTGAAGAGAGAGAACCTTTGAGGATATTTTACGAATCGTTGTCAGAACAGATACCCACAAGTGAAATGGCTGAATTTTGGTTGATGGAACATGGAATGTTGTCTCCTGAAAGAGCCAAGAAGGCCTTTGAGAAGAAGCAAAGGAAGCAGAAACAACTTAGGATGGGAACTCCGATAAAATCTCCTCCAACAACTAGTAGACCCGAGAGTTCCAATAAGCAAAAGCTAGCATCAAAGAATGGCGACATAAAAGCCAAGAAAAGAATTGTTGAAGACAGTGATGATGAATTCATTGGGAGCCCAAAAAGAAGAAAGGGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280186.p1 GENE.S_Transcript_280186~~S_Transcript_280186.p1 ORF type:complete len:186 (+),score=52.60 S_Transcript_280186:269-826(+)
MASAAVKKPISNQAGPSKGKVDVKPILKKTIESSSTKQQSAISSKPQDKGKSTTPTTSTGTKPKRQKKVYSLPGQKYDVPEEREPLRIFYESLSEQIPTSEMAEFWLMEHGMLSPERAKKAFEKKQRKQKQLRMGTPIKSPPTTSRPESSNKQKLASKNGDIKAKKRIVEDSDDEFIGSPKRRKG*

Click here to download the sequence:
Link to NCBI Protein BLAST