Transcript Information: S_Transcript_280220.p1


Annotated TAIR IDAT1G53620.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53610.1); Has 5795 Blast hits to 2209 proteins in 338 species: Archae - 0; Bacteria - 1555; Metazoa - 2403; Fungi - 181; Plants - 1035; Viruses - 76; Other Eukaryotes - 545 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20011602-20011907 | Reverse length=101
E-Value3.7E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63364288655192
Replicate 20.17510150442472
Replicate 30.43911276389525
Condition 2: 8 Hour
Replicate 10.16924912950106
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.17337209119519
Replicate 20
Replicate 31.0008747779808


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280220.p1 GENE.S_Transcript_280220~~S_Transcript_280220.p1 ORF type:complete len:126 (+),score=32.26 S_Transcript_280220:189-566(+)
ATGAAAATGAAACCATATGTTATAATCCTAGTAGTCTTATCAAGTGTGCTTGGTGTTCTTGTCCTGGTTTGTGTCATATTGGGATGCAACCGCAGGAAGTCTAGCGCTCAGAGACCAGCAGTTCCAGTTCAGACAAATCGTGATATGGAAGGAGGTCTCAAAGATGGAGGCATGATTGTTTTGGCAGGCGCTGGTGCTGCTATTGCTGCTGCAGGCACCATTGAATTAGCCAACACAGATAGTCCCGGTGGCTTTGGTGGTGGTGACTCGGGTGGAAATCAAGGAGGAGATAACAGCGGCGGCAGTTGTGGTGGTGGAGGTTGCGGTGGCGGCGGCTGTGGAGGTGGTTGTGGCGGCTGTGGAGGGTGTGGTGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280220.p1 GENE.S_Transcript_280220~~S_Transcript_280220.p1 ORF type:complete len:126 (+),score=32.26 S_Transcript_280220:189-566(+)
MKMKPYVIILVVLSSVLGVLVLVCVILGCNRRKSSAQRPAVPVQTNRDMEGGLKDGGMIVLAGAGAAIAAAGTIELANTDSPGGFGGGDSGGNQGGDNSGGSCGGGGCGGGGCGGGCGGCGGCGG*

Click here to download the sequence:
Link to NCBI Protein BLAST