Transcript Information: S_Transcript_280311.p1


Annotated TAIR IDAT5G08490.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2745208-2747757 | Reverse length=849
E-Value1.5E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53226002470361
Replicate 20.14708526371677
Replicate 30.24590314778134
Condition 2: 8 Hour
Replicate 11.8482004941515
Replicate 21.9388935487763
Replicate 31.4210565069988
Condition 3: 24 Hour
Replicate 10.14563255660396
Replicate 20.9065524630539
Replicate 30.50444088810232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280311.p1 GENE.S_Transcript_280311~~S_Transcript_280311.p1 ORF type:5prime_partial len:150 (+),score=33.66,PPR|PF01535.16|0.096,PPR|PF01535.16|0.99,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|0.084,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.0049,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|3,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|2.1,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|53 S_Transcript_280311:1-450(+)
ATTAGGCCAGATCATGTTGTTCTGACAACCATTTTATTTGCCTGTGGTCATGCTGGTCTTGTGGACGAGGGTTTGAAAATTTTTTATTCCATAGAAAATGTCCATAAAATGAAACCTACCATGGAACAATATTGTTGCATTGTGGATCTTCTTGCTCGACAGGGAAAAGTTAAGGATGCATATGCTTTTGTTACTGAGATGCCTGTCAAGGCCAATGGCAACATATGGAGCATATTGTTAGGTGCTTGTAGGAATTATAATGAGGTGGAAATAGGTCAGATTGCTTCTGATCATCTTTTGAGCGTGGAAGCCAGTGATATTGGGAGTTATGTGACCATGTCAAATCTTCATGCGGCAGATGGCAAGTGGGATGGTGTCTTGGAGATCAGAAAACTAATGAAGAGTAGAGACTTAAGGAAGCTAGCTGGTCGCAGTTGGATTGAAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280311.p1 GENE.S_Transcript_280311~~S_Transcript_280311.p1 ORF type:5prime_partial len:150 (+),score=33.66,PPR|PF01535.16|0.096,PPR|PF01535.16|0.99,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|0.084,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.0049,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|3,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|2.1,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|53 S_Transcript_280311:1-450(+)
IRPDHVVLTTILFACGHAGLVDEGLKIFYSIENVHKMKPTMEQYCCIVDLLARQGKVKDAYAFVTEMPVKANGNIWSILLGACRNYNEVEIGQIASDHLLSVEASDIGSYVTMSNLHAADGKWDGVLEIRKLMKSRDLRKLAGRSWIEA*

Click here to download the sequence:
Link to NCBI Protein BLAST