Transcript Information: S_Transcript_280367.p1


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeOrtholog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value2.1E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8927175255631
Replicate 24.3166327395138
Replicate 34.4102194982523
Condition 2: 8 Hour
Replicate 12.5497749292224
Replicate 23.6475840173467
Replicate 36.0240438883643
Condition 3: 24 Hour
Replicate 13.5616657865099
Replicate 24.6805697820717
Replicate 33.5639845355055


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280367.p1 GENE.S_Transcript_280367~~S_Transcript_280367.p1 ORF type:internal len:92 (-),score=18.97,JmjN|PF02375.13|1.8e-14 S_Transcript_280367:1-273(-)
GGTGCATGTACTTATACACTTGAAGAGGCACCTGTTTTTCATCCTAGTGAAGAGGAGTTCAAGGATACCTTCAAATACATTGAAAGCATACGTCTGCAAGTGCAGCCTTATGGGTTCTGTCGTATTGTCCCTCCACCTGCATGGCAATTGCCATGCTTTCTCGAGGAAGGTGACATTTGGCATAGTTCCAAATTTGCTACCCAACTACAACAAGTTAATGAACTCCAGATTCCCTGGTTGTGTGGACAGTCATCTGCAGCCCTTGACACAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280367.p1 GENE.S_Transcript_280367~~S_Transcript_280367.p1 ORF type:internal len:92 (-),score=18.97,JmjN|PF02375.13|1.8e-14 S_Transcript_280367:1-273(-)
GACTYTLEEAPVFHPSEEEFKDTFKYIESIRLQVQPYGFCRIVPPPAWQLPCFLEEGDIWHSSKFATQLQQVNELQIPWLCGQSSAALDTR

Click here to download the sequence:
Link to NCBI Protein BLAST