Transcript Information: S_Transcript_280369.p1


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeHomolog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value5E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5622465049686
Replicate 20.77685878723644
Replicate 30.2597568462479
Condition 2: 8 Hour
Replicate 10.30035761010047
Replicate 20
Replicate 30.45033480855594
Condition 3: 24 Hour
Replicate 10.30767441536048
Replicate 21.2768344550055
Replicate 30.35524006204389


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_280369.p1 GENE.S_Transcript_280369~~S_Transcript_280369.p1 ORF type:5prime_partial len:142 (+),score=21.18 S_Transcript_280369:1-426(+)
TTTACATTGAAAAGAGTTGAAGAAGATCCTTCAATGCCGACAACCTCAAATGAGTTAGAAGGAACTTCAGCTATCGAGAAAAGTTTGAAGCACGAACGTAAACCTTGGATTCTTCACGACGATCAGTTTCAAAATGAAGTGATTTCGGAATCGAATCACCGTGATATGAACTTTTCAACAAAAGCTTCCCTTCCAAAGGGCGTCATTCGGGGATGTCCAGAATGCAGTGATTGTCAAAAGGTTTTAGCTAGGTGGAATCCTGGTGGTGCATGCACTTATACACTTGAAGAGGCTCCTGTTTTTCATCCTAGTGAAGAGGCATGTCATGTGCTGATAGAAAGTGTCGTTACATTCAAGTTTTTTTGTTTGAAGTTTATGCTTTGCTTTTCCTCATGTGCTTGTATATTTTTACCTTTTGACGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_280369.p1 GENE.S_Transcript_280369~~S_Transcript_280369.p1 ORF type:5prime_partial len:142 (+),score=21.18 S_Transcript_280369:1-426(+)
FTLKRVEEDPSMPTTSNELEGTSAIEKSLKHERKPWILHDDQFQNEVISESNHRDMNFSTKASLPKGVIRGCPECSDCQKVLARWNPGGACTYTLEEAPVFHPSEEACHVLIESVVTFKFFCLKFMLCFSSCACIFLPFDD*

Click here to download the sequence:
Link to NCBI Protein BLAST